RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PPP2R5CQ13362 524 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 PLCB4Q15147 1175 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 PLPPR4Q7Z2D5 763 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 SLFN12Q8IYM2 578 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 ZBTB10Q96DT7 871 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 PRDM5Q9NQX1 630 aaPredicted RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 FBXO2Q9UK22 296 aaPredicted RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 PCDHA7Q9UN72 937 aa16.85■□□□□ 0.29
TRIM28-207ENST00000597136 SRPRBQ9Y5M8 271 aaKnown RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 MAFBQ9Y5Q3 323 aaPredicted RBP16.85■□□□□ 0.29
TRIM28-207ENST00000597136 MROH7Q68CQ1 1323 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 CLTBP09497 229 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 IL17AQ16552 155 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 PTGISQ16647 500 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 AXDND1Q5T1B0 1012 aaPredicted RBP16.84■□□□□ 0.29
TRIM28-207ENST00000597136 PDXDC2PQ6P474 469 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 SESTD1Q86VW0 696 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
TRIM28-207ENST00000597136 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 LMBRD1Q9NUN5 540 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 TMEM39AQ9NV64 488 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 TCEAL9Q9UHQ7 104 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 NR2E3Q9Y5X4 410 aa16.84■□□□□ 0.29
TRIM28-207ENST00000597136 TREHO43280 583 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 INSRRP14616 1297 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 SFNP31947 248 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 TECP42680 631 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 JAK3P52333 1124 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 PTPN11Q06124 597 aaPredicted RBP16.83■□□□□ 0.28
TRIM28-207ENST00000597136 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 NCAPH2Q6IBW4 605 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 BANK1Q8NDB2 785 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 TRAPPC12Q8WVT3 735 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 WNT8BQ93098 351 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 TBX21Q9UL17 535 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
TRIM28-207ENST00000597136 POTEMA6NI47 508 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
TRIM28-207ENST00000597136 HOXC8P31273 242 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 ADAM17P78536 824 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 LMBR1Q8WVP7 490 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 CLIC6Q96NY7 704 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 SEZ6LQ9BYH1 1024 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 RGL1Q9NZL6 768 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 WRAP73Q9P2S5 460 aaPredicted RBP16.82■□□□□ 0.28
TRIM28-207ENST00000597136 IGSF9BQ9UPX0 1349 aa16.82■□□□□ 0.28
TRIM28-207ENST00000597136 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 C17orf102A2RUQ5 167 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 VWA3AA6NCI4 1184 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 KIAA0355O15063 1070 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 CUTAO60888 179 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
TRIM28-207ENST00000597136 STBD1O95210 358 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 IGBP1P78318 339 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 GRIN1Q05586 938 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 ADALQ6DHV7 355 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 POTEBQ6S5H4 581 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 DHX38Q92620 1227 aaKnown RBP16.81■□□□□ 0.28
TRIM28-207ENST00000597136 DYDC2Q96IM9 177 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 TRPC6Q9Y210 931 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 A0A087WWV3 80 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 ZBTB39O15060 712 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 CYP2C18P33260 490 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 PPFIA1Q13136 1202 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 EPHA7Q15375 998 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 GRIK4Q16099 956 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 CKAP2LQ8IYA6 745 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 ZNF579Q8NAF0 562 aaKnown RBP16.81■□□□□ 0.28
TRIM28-207ENST00000597136 RDM1Q8NG50 284 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 ATP6V0A1Q93050 837 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 EIF2AK1Q9BQI3 630 aaKnown RBP16.81■□□□□ 0.28
TRIM28-207ENST00000597136 SH2D3AQ9BRG2 576 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 CSRNP2Q9H175 543 aa16.81■□□□□ 0.28
TRIM28-207ENST00000597136 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 SLITRK3O94933 977 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.282e-12■■■□□ 18.1
TRIM28-207ENST00000597136 UBE2HP62256 183 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 MDM2Q00987 491 aaPredicted RBP16.8■□□□□ 0.28
TRIM28-207ENST00000597136 CYP4A11Q02928 519 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 CTTNQ14247 550 aaKnown RBP16.8■□□□□ 0.28
TRIM28-207ENST00000597136 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
TRIM28-207ENST00000597136 NOD1Q9Y239 953 aa16.8■□□□□ 0.28
TRIM28-207ENST00000597136 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 MYO9BQ13459 2157 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 HBP1O60381 514 aa16.79■□□□□ 0.28
TRIM28-207ENST00000597136 RAG1P15918 1043 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms