RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 FOXR2Q6PJQ5 311 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 TMC6Q7Z403 805 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 KIAA0895Q8NCT3 520 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 ERMNQ8TAM6 284 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 CYP2W1Q8TAV3 490 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 DNAJC19Q96DA6 116 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 DHTKD1Q96HY7 919 aaPredicted RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 LIMA1Q9UHB6 759 aaKnown RBP10.48□□□□□ -0.73
VPS25-205ENST00000590339 PDE4DIPQ5VU43 2346 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 PFASO15067 1338 aa10.48□□□□□ -0.73
VPS25-205ENST00000590339 PSMA7O14818 248 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 SEPT4O43236 478 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 IGHA2P01877 340 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 MUTP22033 750 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 CCNE1P24864 410 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 ZNF76P36508 570 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 SLC12A3P55017 1021 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 STK4Q13043 487 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 TBX2Q13207 712 aaPredicted RBP10.47□□□□□ -0.73
VPS25-205ENST00000590339 STIM1Q13586 685 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 PCNX4Q63HM2 1172 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 LRRC8AQ8IWT6 810 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 ARRDC4Q8NCT1 418 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 IL31RAQ8NI17 732 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
VPS25-205ENST00000590339 DDX12PQ92771 950 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 MXRA8Q9BRK3 442 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 TUFT1Q9NNX1 390 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
VPS25-205ENST00000590339 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 ADD3Q9UEY8 706 aaKnown RBP10.47□□□□□ -0.73
VPS25-205ENST00000590339 DIS3Q9Y2L1 958 aaKnown RBP10.47□□□□□ -0.73
VPS25-205ENST00000590339 UBIAD1Q9Y5Z9 338 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 PLXNB2O15031 1838 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 ARID2Q68CP9 1835 aa10.47□□□□□ -0.73
VPS25-205ENST00000590339 WDR81Q562E7 1941 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 TRIM49BA6NDI0 452 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 LRRC10BA6NIK2 292 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 E9PMD0 336 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 EML1O00423 815 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 PLA2G4BP0C869 781 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 COL6A1P12109 1028 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 ITGB5P18084 799 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 CYP11B2P19099 503 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 KCNJ6P48051 423 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 PMS1P54277 932 aaKnown RBP10.46□□□□□ -0.73
VPS25-205ENST00000590339 RPS6P62753 249 aaKnown RBP10.46□□□□□ -0.73
VPS25-205ENST00000590339 CNTN2Q02246 1040 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 COASYQ13057 564 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 PSMD2Q13200 908 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 NR1I3Q14994 352 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 LRRC26Q2I0M4 334 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 LRCH2Q5VUJ6 765 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 ARMCX5Q6P1M9 558 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 FILIP1Q7Z7B0 1213 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 CATSPER3Q86XQ3 398 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 IRF2BP1Q8IU81 584 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 GUF1Q8N442 669 aaKnown RBP10.46□□□□□ -0.73
VPS25-205ENST00000590339 CHST13Q8NET6 341 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 P2RX5Q93086 422 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 TRERF1Q96PN7 1200 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 CTAGE1Q96RT6 745 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 RIT2Q99578 217 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 DUSP9Q99956 384 aaKnown RBP10.46□□□□□ -0.73
VPS25-205ENST00000590339 WDR11Q9BZH6 1224 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 THAP9Q9H5L6 903 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 FBXO40Q9UH90 709 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 ZHX1Q9UKY1 873 aaPredicted RBP10.46□□□□□ -0.73
VPS25-205ENST00000590339 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
VPS25-205ENST00000590339 KIAA1217Q5T5P2 1943 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 DNAJC25-GNG10A0A024R161 153 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 BICDL2A1A5D9 508 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 KBTBD13C9JR72 458 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 DNM1LO00429 736 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 SLC34A2O95436 690 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
VPS25-205ENST00000590339 PGK1P00558 417 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 ARP10275 920 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 RARBP10826 455 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 EEF1GP26641 437 aaKnown RBP10.45□□□□□ -0.74
VPS25-205ENST00000590339 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
VPS25-205ENST00000590339 PGM5Q15124 567 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 KRT31Q15323 416 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 HSP90AA4PQ58FG1 418 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 CENPPQ6IPU0 288 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 NSMFQ6X4W1 530 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 GPBP1Q86WP2 473 aa10.45□□□□□ -0.74
VPS25-205ENST00000590339 SYT2Q8N9I0 419 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms