RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SERPINC1P01008 464 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 GAP43P17677 238 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 GUCY2CP25092 1073 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 RARRES1P49788 294 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 PMS1P54277 932 aaKnown RBP12.66□□□□□ -0.38
SMAD4-205ENST00000588745 HSP90AA4PQ58FG1 418 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 TTI2Q6NXR4 508 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 CCDC60Q8IWA6 550 aaPredicted RBP12.66□□□□□ -0.38
SMAD4-205ENST00000588745 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 GLIS3Q8NEA6 775 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
SMAD4-205ENST00000588745 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
SMAD4-205ENST00000588745 SYNGAP1Q96PV0 1343 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 RSPH10B2B2RC85 870 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 KIF20AO95235 890 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 ATG7O95352 703 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 ARIH2O95376 493 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 GGPS1O95749 300 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
SMAD4-205ENST00000588745 RSPH10BP0C881 870 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 CDK11BP21127 795 aaKnown RBP12.65□□□□□ -0.38
SMAD4-205ENST00000588745 ZNF131P52739 623 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 SPAG1Q07617 926 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 LRRC41Q15345 812 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 HS1BP3Q53T59 392 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 CENPPQ6IPU0 288 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 FOXR2Q6PJQ5 311 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 PADI6Q6TGC4 694 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 METTL7BQ6UX53 244 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 NOC3LQ8WTT2 800 aaKnown RBP12.65□□□□□ -0.38
SMAD4-205ENST00000588745 FGFBP2Q9BYJ0 223 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 VTA1Q9NP79 307 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
SMAD4-205ENST00000588745 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.38
SMAD4-205ENST00000588745 DIS3Q9Y2L1 958 aaKnown RBP12.65□□□□□ -0.38
SMAD4-205ENST00000588745 GOLGA6L6A8MZA4 724 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 BACH1O14867 736 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 ZNF862O60290 1169 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 TLR2O60603 784 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 TPM3P06753 285 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 UBASH3AP57075 661 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 PRKCEQ02156 737 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 LY6KQ17RY6 165 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 SWSAP1Q6NVH7 229 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 C17orf99Q6UX52 265 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 MAMDC4Q6UXC1 1216 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 DRC7Q8IY82 874 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 SPC24Q8NBT2 197 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
SMAD4-205ENST00000588745 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 PARVGQ9HBI0 331 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 ZNF302Q9NR11 478 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
SMAD4-205ENST00000588745 MYH11P35749 1972 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 IGKV6D-21A0A0A0MT36 114 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 GSTTP1A0A1W2PQM5 241 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 TMEM150BA6NC51 233 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 HIP1RO75146 1068 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 STBD1O95210 358 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 TM4SF4P48230 202 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 MAPK7Q13164 816 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 TTLL4Q14679 1199 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 XKR9Q5GH70 373 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 UTP14CQ5TAP6 766 aaKnown RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 ANKRD40Q6AI12 368 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 PAXIP1Q6ZW49 1069 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 ANO5Q75V66 913 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 EPM2AIP1Q7L775 607 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 APTXQ7Z2E3 356 aaKnown RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 MAML3Q96JK9 1138 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 CTAGE1Q96RT6 745 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 TSG101Q99816 390 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 SLC5A4Q9NY91 659 aa12.63□□□□□ -0.39
SMAD4-205ENST00000588745 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 MAFBQ9Y5Q3 323 aaPredicted RBP12.63□□□□□ -0.39
SMAD4-205ENST00000588745 MYH9P35579 1960 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms