RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 WNT8BQ93098 351 aa24.09■■□□□ 1.45
RETREG3-204ENST00000586796 EIF2AK1Q9BQI3 630 aaKnown RBP24.09■■□□□ 1.45
RETREG3-204ENST00000586796 ZSCAN16Q9H4T2 348 aaPredicted RBP24.09■■□□□ 1.45
RETREG3-204ENST00000586796 NRBP2Q9NSY0 501 aa24.09■■□□□ 1.45
RETREG3-204ENST00000586796 TUBE1Q9UJT0 475 aa24.09■■□□□ 1.45
RETREG3-204ENST00000586796 DDX11L8A8MPP1 907 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 QARSP47897 775 aaKnown RBP24.08■■□□□ 1.45
RETREG3-204ENST00000586796 ADAM17P78536 824 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 PKP1Q13835 747 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 MARCH8Q5T0T0 291 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 SERINC5Q86VE9 423 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 TPH2Q8IWU9 490 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 CCDC155Q8N6L0 562 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 FAM167AQ96KS9 214 aa24.08■■□□□ 1.45
RETREG3-204ENST00000586796 SEPT9Q9UHD8 586 aaPredicted RBP24.08■■□□□ 1.45
RETREG3-204ENST00000586796 TMEM150BA6NC51 233 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 LAD1O00515 517 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 THPOP40225 353 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 CEBPZQ03701 1054 aaKnown RBP24.07■■□□□ 1.44
RETREG3-204ENST00000586796 SF3A1Q15459 793 aaKnown RBP24.07■■□□□ 1.44
RETREG3-204ENST00000586796 ZNF484Q5JVG2 852 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 MFSD5Q6N075 450 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 CHRDL2Q6WN34 429 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 RUFY4Q6ZNE9 571 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 SCLYQ96I15 445 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 LXNQ9BS40 222 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.445e-9■■■■□ 21.6
RETREG3-204ENST00000586796 WNT8AQ9H1J5 351 aa24.07■■□□□ 1.44
RETREG3-204ENST00000586796 ZSCAN22P10073 491 aaPredicted RBP24.06■■□□□ 1.44
RETREG3-204ENST00000586796 KLRC1P26715 233 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 ATP2C1P98194 919 aaPredicted RBP24.06■■□□□ 1.44
RETREG3-204ENST00000586796 FOXD4L6Q3SYB3 417 aaPredicted RBP24.06■■□□□ 1.44
RETREG3-204ENST00000586796 FOXD4L3Q6VB84 417 aaPredicted RBP24.06■■□□□ 1.44
RETREG3-204ENST00000586796 DTHD1Q6ZMT9 781 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 TMEM199Q8N511 208 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 CAGE1Q8TC20 777 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 SH2D3AQ9BRG2 576 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 WRAP73Q9P2S5 460 aaPredicted RBP24.06■■□□□ 1.44
RETREG3-204ENST00000586796 CLIC4Q9Y696 253 aa24.06■■□□□ 1.44
RETREG3-204ENST00000586796 DKC1O60832 514 aaKnown RBP eCLIP24.05■■□□□ 1.44
RETREG3-204ENST00000586796 SLITRK3O94933 977 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 CKBP12277 381 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 PDIA4P13667 645 aaKnown RBP24.05■■□□□ 1.44
RETREG3-204ENST00000586796 CSF2RAP15509 400 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 FXR2P51116 673 aaKnown RBP eCLIP24.05■■□□□ 1.44
RETREG3-204ENST00000586796 FPGSQ05932 587 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 IL17AQ16552 155 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 MTERF2Q49AM1 385 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 XKR3Q5GH77 459 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 MTHFD1LQ6UB35 978 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 UBE2OQ9C0C9 1292 aaKnown RBP24.05■■□□□ 1.44
RETREG3-204ENST00000586796 FAM49AQ9H0Q0 323 aaPredicted RBP24.05■■□□□ 1.44
RETREG3-204ENST00000586796 LRWD1Q9UFC0 647 aa24.05■■□□□ 1.44
RETREG3-204ENST00000586796 COL1A2P08123 1366 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 PDE4DIPQ5VU43 2346 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 MBLAC1A4D2B0 266 aaPredicted RBP24.04■■□□□ 1.44
RETREG3-204ENST00000586796 ZBTB42B2RXF5 422 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 PITPNM1O00562 1244 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 STBD1O95210 358 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 PRPHP41219 470 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 TRIM71Q2Q1W2 868 aaKnown RBP24.04■■□□□ 1.44
RETREG3-204ENST00000586796 ZNF618Q5T7W0 954 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 PLA2G4FQ68DD2 849 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 ERMNQ8TAM6 284 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 DNAJB3Q8WWF6 145 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 GDF15Q99988 308 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 HSD17B14Q9BPX1 270 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 ZSWIM4Q9H7M6 989 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 DAXXQ9UER7 740 aaPredicted RBP24.04■■□□□ 1.44
RETREG3-204ENST00000586796 CEP131Q9UPN4 1083 aa24.04■■□□□ 1.44
RETREG3-204ENST00000586796 VWA3AA6NCI4 1184 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 F13A1P00488 732 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 CTSHP09668 335 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 IQCF3P0C7M6 154 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 SELPP16109 830 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 TAF2Q6P1X5 1199 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 LRRC8DQ7L1W4 858 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 METTL13Q8N6R0 699 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 NEK9Q8TD19 979 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 RAB34Q9BZG1 259 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 TRIP12Q14669 1992 aaPredicted RBP24.03■■□□□ 1.44
RETREG3-204ENST00000586796 LTBP2Q14767 1821 aa24.03■■□□□ 1.44
RETREG3-204ENST00000586796 MYH9P35579 1960 aaKnown RBP24.02■■□□□ 1.44
RETREG3-204ENST00000586796 A0A087WWV3 80 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 RBAK-RBAKDNI3L0D1 243 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 ZBTB39O15060 712 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 MED24O75448 989 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 ACRP10323 421 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 ANO5Q75V66 913 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 DEFB128Q7Z7B8 93 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 C4orf19Q8IY42 314 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 USP28Q96RU2 1077 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 NIFKQ9BYG3 293 aaKnown RBP24.02■■□□□ 1.44
RETREG3-204ENST00000586796 COLQQ9Y215 455 aaPredicted RBP24.02■■□□□ 1.44
RETREG3-204ENST00000586796 PCDHA2Q9Y5H9 948 aa24.02■■□□□ 1.44
RETREG3-204ENST00000586796 PP2D1A8MPX8 630 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 C22orf31O95567 290 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 BMP15O95972 392 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 CDC25AP30304 524 aa24.01■■□□□ 1.43
RETREG3-204ENST00000586796 YWHABP31946 246 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms