RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NSUN7Q8NE18 718 aaKnown RBP23.1■■□□□ 1.29
SS18-224ENST00000584083 ATP8B4Q8TF62 1192 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 SLC5A5Q92911 643 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 RIT2Q99578 217 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 TEKT3Q9BXF9 490 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 OSBPL7Q9BZF2 842 aa23.1■■□□□ 1.29
SS18-224ENST00000584083 EVPLQ92817 2033 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 COL6A3P12111 3177 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 WDR64B1ANS9 1081 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 TLL1O43897 1013 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 RPLP2P05387 115 aaKnown RBP23.09■■□□□ 1.29
SS18-224ENST00000584083 CA3P07451 260 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 LETM2Q2VYF4 491 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 TRMT1LQ7Z2T5 733 aaKnown RBP23.09■■□□□ 1.29
SS18-224ENST00000584083 TMCO2Q7Z6W1 182 aaPredicted RBP23.09■■□□□ 1.29
SS18-224ENST00000584083 OXER1Q8TDS5 423 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 GJA10Q969M2 543 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 PRDM12Q9H4Q4 367 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 GABBR1Q9UBS5 961 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 PCDHA2Q9Y5H9 948 aa23.09■■□□□ 1.29
SS18-224ENST00000584083 LOXHD1Q8IVV2 1947 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 CHMP2AO43633 222 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 JAK2O60674 1132 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 FOSBP53539 338 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 MOXD1Q6UVY6 613 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 PIK3AP1Q6ZUJ8 805 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 GAS2L1Q99501 681 aaPredicted RBP23.08■■□□□ 1.29
SS18-224ENST00000584083 BRMS1Q9HCU9 246 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 DISC1Q9NRI5 854 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 DDX25Q9UHL0 483 aaKnown RBP23.08■■□□□ 1.29
SS18-224ENST00000584083 MAFBQ9Y5Q3 323 aaPredicted RBP23.08■■□□□ 1.29
SS18-224ENST00000584083 CDY2AQ9Y6F7 541 aa23.08■■□□□ 1.29
SS18-224ENST00000584083 SIP14410 1827 aa23.08■■□□□ 1.28
SS18-224ENST00000584083 AMHP03971 560 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 GHRP10912 638 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 ATP4AP20648 1035 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 KLRC1P26715 233 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 KRT2P35908 639 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 MRPS6P82932 125 aaKnown RBP23.07■■□□□ 1.28
SS18-224ENST00000584083 TRIM29Q14134 588 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 ZNF484Q5JVG2 852 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 IER5Q5VY09 327 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 MTHFD1LQ6UB35 978 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.07■■□□□ 1.28
SS18-224ENST00000584083 NEK8Q86SG6 692 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 MBOAT7Q96N66 472 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 IFIH1Q9BYX4 1025 aaKnown RBP23.07■■□□□ 1.28
SS18-224ENST00000584083 UNC45AQ9H3U1 944 aa23.07■■□□□ 1.28
SS18-224ENST00000584083 COL1A2P08123 1366 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 M0QZ92 97 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 SFNP31947 248 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 JAK3P52333 1124 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 MGAT3Q09327 533 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 TMEM62Q0P6H9 643 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 FAM117BQ6P1L5 589 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 SLC17A8Q8NDX2 589 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 MAFAQ8NHW3 353 aaPredicted RBP23.06■■□□□ 1.28
SS18-224ENST00000584083 BBXQ8WY36 941 aaPredicted RBP23.06■■□□□ 1.28
SS18-224ENST00000584083 APBB2Q92870 758 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 KIF2CQ99661 725 aa23.06■■□□□ 1.28
SS18-224ENST00000584083 CHD9Q3L8U1 2897 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 SMIM35A0A1B0GVV1 85 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 PSMD10O75832 226 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 ST3GAL1Q11201 340 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 MIER3Q7Z3K6 550 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 CCDC83Q8IWF9 413 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 MYOCDQ8IZQ8 938 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 FAM167AQ96KS9 214 aa23.05■■□□□ 1.28
SS18-224ENST00000584083 SLC37A4O43826 429 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 CCNT1O60563 726 aaKnown RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 GJB5O95377 273 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 GCFC2P16383 781 aaKnown RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 RBM25P49756 843 aaKnown RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 NR5A1Q13285 461 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 LPIN1Q14693 890 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 NME8Q8N427 588 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 ETNPPLQ8TBG4 499 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 ZSCAN31Q96LW9 406 aaPredicted RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 RAD9AQ99638 391 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 NAP1L4Q99733 375 aaKnown RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 CERS4Q9HA82 394 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 UPF2Q9HAU5 1272 aaKnown RBP23.04■■□□□ 1.28
SS18-224ENST00000584083 TRPV2Q9Y5S1 764 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 IGSF9BQ9UPX0 1349 aa23.04■■□□□ 1.28
SS18-224ENST00000584083 MARCH6O60337 910 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 TAP1Q03518 808 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 FBXO47Q5MNV8 452 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 PPP4R3AQ6IN85 833 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 RDM1Q8NG50 284 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 NRBP2Q9NSY0 501 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 CEP131Q9UPN4 1083 aa23.03■■□□□ 1.28
SS18-224ENST00000584083 LCHNA4D1U4 455 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 FAM205CA6NFA0 338 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 ZBTB42B2RXF5 422 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 MMP1P03956 469 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 IGFBP4P22692 258 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 MKRN4PQ13434 485 aaPredicted RBP23.02■■□□□ 1.28
SS18-224ENST00000584083 EARS2Q5JPH6 523 aaKnown RBP23.02■■□□□ 1.28
SS18-224ENST00000584083 KRT40Q6A162 431 aa23.02■■□□□ 1.28
SS18-224ENST00000584083 TSHZ1Q6ZSZ6 1077 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms