RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 CCDC60Q8IWA6 550 aaPredicted RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 GJA10Q969M2 543 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 LENG1Q96BZ8 264 aaPredicted RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 FAM167AQ96KS9 214 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PYM1Q9BRP8 204 aaKnown RBP11.67□□□□□ -0.54
CCDC47-203ENST00000580986 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 AZI2Q9H6S1 392 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 ERAP1Q9NZ08 941 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PCDHA7Q9UN72 937 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 SAMM50Q9Y512 469 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
CCDC47-203ENST00000580986 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 HAS3O00219 553 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 CMA1P23946 247 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 UBA7P41226 1012 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 STAT5BP51692 787 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 PCYT2Q99447 389 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 LXNQ9BS40 222 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 MTG1Q9BT17 334 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-203ENST00000580986 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
CCDC47-203ENST00000580986 ZNF302Q9NR11 478 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 PHF24Q9UPV7 400 aa11.66□□□□□ -0.54
CCDC47-203ENST00000580986 MYADML2A6NDP7 307 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 H3BRB1 525 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
CCDC47-203ENST00000580986 CHMP2AO43633 222 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SLITRK3O94933 977 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 ASGR1P07306 291 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 GRIN1Q05586 938 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 KCNA10Q16322 511 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SHC4Q6S5L8 630 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SESTD1Q86VW0 696 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 CATSPER3Q86XQ3 398 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.54
CCDC47-203ENST00000580986 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
CCDC47-203ENST00000580986 CALML4Q96GE6 196 aa11.65□□□□□ -0.54
CCDC47-203ENST00000580986 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
CCDC47-203ENST00000580986 COL1A2P08123 1366 aa11.65□□□□□ -0.55
CCDC47-203ENST00000580986 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 BACH1O14867 736 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 ZNF862O60290 1169 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 HBP1O60381 514 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 MED24O75448 989 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 COL6A1P12109 1028 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 PTGS1P23219 599 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 HOXC8P31273 242 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CCT6AP40227 531 aaKnown RBP11.64□□□□□ -0.55
CCDC47-203ENST00000580986 ACLYP53396 1101 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 BEX3Q00994 111 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 SP4Q02446 784 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 PTPN11Q06124 597 aaPredicted RBP11.64□□□□□ -0.55
CCDC47-203ENST00000580986 TMEM119Q4V9L6 283 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 COL13A1Q5TAT6 717 aaPredicted RBP11.64□□□□□ -0.55
CCDC47-203ENST00000580986 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 PDXDC2PQ6P474 469 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 NFRKBQ6P4R8 1299 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CABP7Q86V35 215 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 ATP8B4Q8TF62 1192 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 KAT2BQ92831 832 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 GLG1Q92896 1179 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 NACC1Q96RE7 527 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 UIMC1Q96RL1 719 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 NIFKQ9BYG3 293 aaKnown RBP11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CUEDC2Q9H467 287 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 ANKEF1Q9NU02 776 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 FAM13BQ9NYF5 915 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 GABBR1Q9UBS5 961 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 STK17AQ9UEE5 414 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
CCDC47-203ENST00000580986 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 ARID2Q68CP9 1835 aa11.64□□□□□ -0.55
CCDC47-203ENST00000580986 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 PP2D1A8MPX8 630 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 OATP04181 439 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 UBE2HP62256 183 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 PRKCEQ02156 737 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 UGCGQ16739 394 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 CCDC73Q6ZRK6 1079 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 EXOC8Q8IYI6 725 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 SLC43A3Q8NBI5 491 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 MRPS27Q92552 414 aaKnown RBP11.63□□□□□ -0.55
CCDC47-203ENST00000580986 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
CCDC47-203ENST00000580986 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms