RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 FOSL2P15408 326 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 DEFB103AP81534 67 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 Q4G0T1 1027 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 ATP8B4Q8TF62 1192 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 SLC5A5Q92911 643 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 BRMS1Q9HCU9 246 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 DISC1Q9NRI5 854 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 DDX25Q9UHL0 483 aaKnown RBP18.8■□□□□ 0.6
SREBF1-219ENST00000580540 MYO9BQ13459 2157 aa18.8■□□□□ 0.6
SREBF1-219ENST00000580540 CYP3A7-CYP3A51PA0A087WV96 503 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 TLL1O43897 1013 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 EFCAB14O75071 495 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 CA3P07451 260 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 CYP3A7P24462 503 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 KRT2P35908 639 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 TRIM29Q14134 588 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 FAM26DQ5JW98 314 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.79■□□□□ 0.6
SREBF1-219ENST00000580540 RIT2Q99578 217 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 CDY2AQ9Y6F7 541 aa18.79■□□□□ 0.6
SREBF1-219ENST00000580540 M0QZ92 97 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MARCH6O60337 910 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 GHRP10912 638 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 ATP4AP20648 1035 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 KLRC1P26715 233 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MRPS6P82932 125 aaKnown RBP18.78■□□□□ 0.6
SREBF1-219ENST00000580540 ST3GAL1Q11201 340 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 NR5A1Q13285 461 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 ZNF484Q5JVG2 852 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MTHFD1LQ6UB35 978 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MIER3Q7Z3K6 550 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 NEK8Q86SG6 692 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MYOCDQ8IZQ8 938 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-219ENST00000580540 KIF2CQ99661 725 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 CERS4Q9HA82 394 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 UPF2Q9HAU5 1272 aaKnown RBP18.78■□□□□ 0.6
SREBF1-219ENST00000580540 PCDHA2Q9Y5H9 948 aa18.78■□□□□ 0.6
SREBF1-219ENST00000580540 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
SREBF1-219ENST00000580540 SLC37A4O43826 429 aa18.77■□□□□ 0.6
SREBF1-219ENST00000580540 CCNT1O60563 726 aaKnown RBP18.77■□□□□ 0.6
SREBF1-219ENST00000580540 AMHP03971 560 aa18.77■□□□□ 0.6
SREBF1-219ENST00000580540 IER5Q5VY09 327 aa18.77■□□□□ 0.6
SREBF1-219ENST00000580540 MOXD1Q6UVY6 613 aa18.77■□□□□ 0.6
SREBF1-219ENST00000580540 BBXQ8WY36 941 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-219ENST00000580540 ZSCAN31Q96LW9 406 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-219ENST00000580540 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.6
SREBF1-219ENST00000580540 MYH9P35579 1960 aaKnown RBP18.76■□□□□ 0.59
SREBF1-219ENST00000580540 FAM205CA6NFA0 338 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 PSMD10O75832 226 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 RPLP2P05387 115 aaKnown RBP18.76■□□□□ 0.59
SREBF1-219ENST00000580540 SFNP31947 248 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 JAK3P52333 1124 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 GUCY1B3Q02153 619 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 MGAT3Q09327 533 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 EARS2Q5JPH6 523 aaKnown RBP18.76■□□□□ 0.59
SREBF1-219ENST00000580540 KRT40Q6A162 431 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 SLC17A8Q8NDX2 589 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 MAFAQ8NHW3 353 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-219ENST00000580540 MBOAT7Q96N66 472 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 GINS2Q9Y248 185 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 TRPV2Q9Y5S1 764 aa18.76■□□□□ 0.59
SREBF1-219ENST00000580540 SMIM35A0A1B0GVV1 85 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 UPP2O95045 317 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 IGFBP4P22692 258 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 RBM25P49756 843 aaKnown RBP18.75■□□□□ 0.59
SREBF1-219ENST00000580540 LPIN1Q14693 890 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 DIS3L2Q8IYB7 885 aaKnown RBP18.75■□□□□ 0.59
SREBF1-219ENST00000580540 METTL13Q8N6R0 699 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 ETNPPLQ8TBG4 499 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 APBB2Q92870 758 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 FAM167AQ96KS9 214 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 NRBP2Q9NSY0 501 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 COL1A2P08123 1366 aa18.75■□□□□ 0.59
SREBF1-219ENST00000580540 LCHNA4D1U4 455 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 BTBD18B2RXH4 712 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 GJB5O95377 273 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 MMP1P03956 469 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 GCFC2P16383 781 aaKnown RBP18.74■□□□□ 0.59
SREBF1-219ENST00000580540 PRKCEQ02156 737 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 RABEP1Q15276 862 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 UGCGQ16739 394 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 FBXO47Q5MNV8 452 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 NME8Q8N427 588 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 PPM1EQ8WY54 764 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 PPP1R16BQ96T49 567 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 RAD9AQ99638 391 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 NAP1L4Q99733 375 aaKnown RBP18.74■□□□□ 0.59
SREBF1-219ENST00000580540 CELF4Q9BZC1 486 aaKnown RBP18.74■□□□□ 0.59
SREBF1-219ENST00000580540 SH2B1Q9NRF2 756 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-219ENST00000580540 CEP131Q9UPN4 1083 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 IGSF9BQ9UPX0 1349 aa18.74■□□□□ 0.59
SREBF1-219ENST00000580540 ZBTB42B2RXF5 422 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms