RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 DUSP9Q99956 384 aaKnown RBP4.95□□□□□ -1.62
DDX42-211ENST00000580108 RNF32Q9H0A6 362 aa4.95□□□□□ -1.62
DDX42-211ENST00000580108 MIR1-1HGQ9H1L0 117 aa4.95□□□□□ -1.62
DDX42-211ENST00000580108 TDRD3Q9H7E2 651 aaKnown RBP4.95□□□□□ -1.62
DDX42-211ENST00000580108 CEP131Q9UPN4 1083 aa4.95□□□□□ -1.62
DDX42-211ENST00000580108 TLR6Q9Y2C9 796 aa4.95□□□□□ -1.62
DDX42-211ENST00000580108 FAM205AQ6ZU69 1335 aa4.95□□□□□ -1.62
DDX42-211ENST00000580108 UPK3BL1B0FP48 263 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 TCP10L2B9ZVM9 353 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 UPK3BL2E5RIL1 263 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 ETV2O00321 342 aaPredicted RBP4.94□□□□□ -1.62
DDX42-211ENST00000580108 LRRN2O75325 713 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 PDE8BO95263 885 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 ETV3P41162 512 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 CRKP46108 304 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 RPL6Q02878 288 aaKnown RBP4.94□□□□□ -1.62
DDX42-211ENST00000580108 KCNA10Q16322 511 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 TSNAXIP1Q2TAA8 658 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 TIGD5Q53EQ6 642 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 ATG14Q6ZNE5 492 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 TMEM57Q8N5G2 664 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 DTWD2Q8NBA8 298 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 GPR62Q9BZJ7 368 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 DEFB129Q9H1M3 183 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 RNF186Q9NXI6 227 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 ZNF70Q9UC06 446 aaPredicted RBP4.94□□□□□ -1.62
DDX42-211ENST00000580108 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 HDAC9Q9UKV0 1011 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 CDK5RAP2Q96SN8 1893 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 MROH5Q6ZUA9 1318 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 MYO3BQ8WXR4 1341 aa4.94□□□□□ -1.62
DDX42-211ENST00000580108 LAMB1P07942 1786 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 DOCK2Q92608 1830 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 PNMA6EA0A0J9YXQ4 647 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 TBC1D8O95759 1140 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 ZGLP1P0C6A0 271 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 TMEM253P0C7T8 217 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 GLDCP23378 1020 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 MAP2K2P36507 400 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 TIMM10P62072 90 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 MAP2K1Q02750 393 aaPredicted RBP4.93□□□□□ -1.62
DDX42-211ENST00000580108 TFCP2Q12800 502 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 RASA3Q14644 834 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 PUM3Q15397 648 aaKnown RBP4.93□□□□□ -1.62
DDX42-211ENST00000580108 INTS3Q68E01 1043 aaKnown RBP4.93□□□□□ -1.62
DDX42-211ENST00000580108 LILRA6Q6PI73 481 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 PHC3Q8NDX5 983 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 PANK1Q8TE04 598 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 ABHD8Q96I13 439 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 HHIPL1Q96JK4 782 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 TEPSINQ96N21 525 aa4.93□□□□□ -1.62
DDX42-211ENST00000580108 API5Q9BZZ5 524 aaKnown RBP4.93□□□□□ -1.62
DDX42-211ENST00000580108 SRGAP3O43295 1099 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 FRAT2O75474 233 aaPredicted RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 USP2O75604 605 aaPredicted RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 IFIT1P09914 478 aaKnown RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 SLC5A1P13866 664 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 PRDX5P30044 214 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 CAP1Q01518 475 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 EGR3Q06889 387 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 NOGQ13253 232 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 ATP2B3Q16720 1220 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 APOBEC3HQ6NTF7 200 aaKnown RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 ATF7IPQ6VMQ6 1270 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 TSPYL5Q86VY4 417 aaPredicted RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 VPS37DQ86XT2 251 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 APOBEC3FQ8IUX4 373 aaKnown RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 ZFPM1Q8IX07 1006 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 CYB5D2Q8WUJ1 264 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 WNK4Q96J92 1243 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 MCOLN1Q9GZU1 580 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 EBF1Q9UH73 591 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 DUSP13Q9UII6 198 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 SMG5Q9UPR3 1016 aaKnown RBP4.92□□□□□ -1.62
DDX42-211ENST00000580108 PCDHA11Q9Y5I1 949 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 SIPA1L1O43166 1804 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 KIF16BQ96L93 1317 aa4.92□□□□□ -1.62
DDX42-211ENST00000580108 ATAD5Q96QE3 1844 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 A0A1B0GUL7 405 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 CTSHP09668 335 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 CT47B1P0C2W7 299 aaPredicted RBP4.91□□□□□ -1.62
DDX42-211ENST00000580108 LINC00310P59036 64 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 FKBP1AP62942 108 aaKnown RBP4.91□□□□□ -1.62
DDX42-211ENST00000580108 PDE4BQ07343 736 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 TCP10Q12799 353 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 RASGRF1Q13972 1273 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 CAVIN4Q5BKX8 364 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 LDLRAD1Q5T700 205 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 ZKSCAN2Q63HK3 967 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 BNC2Q6ZN30 1099 aaPredicted RBP4.91□□□□□ -1.62
DDX42-211ENST00000580108 MIGA2Q7L4E1 593 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 ITPRIPQ8IWB1 547 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 FAM13CQ8NE31 585 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 PDZD8Q8NEN9 1154 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 ZNF384Q8TF68 577 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 LPIN2Q92539 896 aa4.91□□□□□ -1.62
DDX42-211ENST00000580108 NEUROD6Q96NK8 337 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms