RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	DEFB103A	P81534	67 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MGAT3	Q09327	533 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GRIN2C	Q14957	1233 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	LRCH2	Q5VUJ6	765 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PPP2R2D	Q66LE6	453 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SWSAP1	Q6NVH7	229 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	NEK8	Q86SG6	692 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	DBF4B	Q8NFT6	615 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	TRAPPC12	Q8WVT3	735 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	DNAJB3	Q8WWF6	145 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SEPT8	Q92599	483 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	KIF2C	Q99661	725 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	BRMS1	Q9HCU9	246 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	DDX25	Q9UHL0	483 aa	Known RBP	12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	LIMCH1	Q9UPQ0	1083 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SAMM50	Q9Y512	469 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PCDHA10	Q9Y5I2	948 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	COL6A3	P12111	3177 aa		12.36	□□□□□ -0.43
PPP4R1-208	ENST00000578178	KIF28P	B7ZC32	967 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CHMP2A	O43633	222 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PSMD10	O75832	226 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CHRNA1	P02708	482 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CA3	P07451	260 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GCFC2	P16383	781 aa	Known RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SFN	P31947	248 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	KRT2	P35908	639 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MRPS6	P82932	125 aa	Known RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MKRN4P	Q13434	485 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	LETM2	Q2VYF4	491 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PIK3AP1	Q6ZUJ8	805 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CKAP2L	Q8IYA6	745 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	ETNPPL	Q8TBG4	499 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	OXER1	Q8TDS5	423 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	BBX	Q8WY36	941 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	APBB2	Q92870	758 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	ZBTB10	Q96DT7	871 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	FAM167A	Q96KS9	214 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	IFIH1	Q9BYX4	1025 aa	Known RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	FAM49A	Q9H0Q0	323 aa	Predicted RBP	12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	UNC45A	Q9H3U1	944 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	DISC1	Q9NRI5	854 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GABBR1	Q9UBS5	961 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PCDHA2	Q9Y5H9	948 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CDY2A	Q9Y6F7	541 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	LOXHD1	Q8IVV2	1947 aa		12.35	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CHD9	Q3L8U1	2897 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	EVPL	Q92817	2033 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SMIM35	A0A1B0GVV1	85 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	RBAK-RBAKDN	I3L0D1	243 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178		M0QZ92	97 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SLC37A4	O43826	429 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	TLL1	O43897	1013 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GJB5	O95377	273 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MMP1	P03956	469 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	AMH	P03971	560 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GHR	P10912	638 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	ATP4A	P20648	1035 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	TRIM29	Q14134	588 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	ZNF484	Q5JVG2	852 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	PPP4R3A	Q6IN85	833 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	MTHFD1L	Q6UB35	978 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CCDC83	Q8IWF9	413 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	RDM1	Q8NG50	284 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	GJA10	Q969M2	543 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	NAP1L4	Q99733	375 aa	Known RBP	12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	OSBPL7	Q9BZF2	842 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	UPF2	Q9HAU5	1272 aa	Known RBP	12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	CEP131	Q9UPN4	1083 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	TRPV2	Q9Y5S1	764 aa		12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	COL4A4	P53420	1690 aa	Predicted RBP	12.34	□□□□□ -0.43
PPP4R1-208	ENST00000578178	COL4A6	Q14031	1691 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	ZBTB42	B2RXF5	422 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	FOSB	P53539	338 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	PRKCE	Q02156	737 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	NR5A1	Q13285	461 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	LPIN1	Q14693	890 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	RABEP1	Q15276	862 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	FBXO47	Q5MNV8	452 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	IER5	Q5VY09	327 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	B3GNT9	Q6UX72	402 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.33	□□□□□ -0.44	8e-10	■■■■■ 38.8
PPP4R1-208	ENST00000578178	TSHZ1	Q6ZSZ6	1077 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	MIER3	Q7Z3K6	550 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	DIS3L2	Q8IYB7	885 aa	Known RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	MYOCD	Q8IZQ8	938 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	MAFA	Q8NHW3	353 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	TNFRSF25	Q93038	417 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	GAS2L1	Q99501	681 aa	Predicted RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	LLPH	Q9BRT6	129 aa	Known RBP	12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	ZBED2	Q9BTP6	218 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	PRDM12	Q9H4Q4	367 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	KCNMB3	Q9NPA1	279 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	KDM3A	Q9Y4C1	1321 aa		12.33	□□□□□ -0.44
PPP4R1-208	ENST00000578178	FAM205C	A6NFA0	338 aa		12.32	□□□□□ -0.44
PPP4R1-208	ENST00000578178	ZNF862	O60290	1169 aa		12.32	□□□□□ -0.44
PPP4R1-208	ENST00000578178	CCNT1	O60563	726 aa	Known RBP	12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms