RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 CCDC148Q8NFR7 591 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
LITAF-219ENST00000576334 MYH9P35579 1960 aaKnown RBP13.49□□□□□ -0.25
LITAF-219ENST00000576334 ZBTB42B2RXF5 422 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 MSH4O15457 936 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 CHMP2AO43633 222 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 EFCAB14O75071 495 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 TDP2O95551 362 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 AMHP03971 560 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 KLRC1P26715 233 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 CD52P31358 61 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 CIITAP33076 1130 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 AK2P54819 239 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 MRPS6P82932 125 aaKnown RBP13.49□□□□□ -0.25
LITAF-219ENST00000576334 HTRA4P83105 476 aaPredicted RBP13.49□□□□□ -0.25
LITAF-219ENST00000576334 TFF2Q03403 129 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 UGCGQ16739 394 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 PDXDC2PQ6P474 469 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 MTHFD1LQ6UB35 978 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 RPAINQ86UA6 219 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 TEX2Q8IWB9 1127 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 TOP1MTQ969P6 601 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 ZNF302Q9NR11 478 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 SH3GLB2Q9NR46 395 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
LITAF-219ENST00000576334 RRN3P2A6NIE6 340 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 DEXIO95424 95 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 ERICH6BQ5W0A0 696 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 MIS18BP1Q6P0N0 1132 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 RTN4RL1Q86UN2 441 aaPredicted RBP13.48□□□□□ -0.25
LITAF-219ENST00000576334 CKAP2LQ8IYA6 745 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 BLIDQ8IZY5 108 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 BICD2Q8TD16 824 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 OXER1Q8TDS5 423 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 ATP8B4Q8TF62 1192 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
LITAF-219ENST00000576334 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 INSL6Q9Y581 213 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 PCDHA2Q9Y5H9 948 aa13.48□□□□□ -0.25
LITAF-219ENST00000576334 TCF20Q9UGU0 1960 aaKnown RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 ENPP3O14638 875 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 ZNF862O60290 1169 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 PFKFB2O60825 505 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 ERVK-21P61565 698 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 SETQ01105 290 aaPredicted RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 SKIV2LQ15477 1246 aaKnown RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 ME3Q16798 604 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 INF2Q27J81 1249 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 FAM160B1Q5W0V3 765 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 RSPH3Q86UC2 560 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 ZNF668Q96K58 619 aaPredicted RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 TGS1Q96RS0 853 aaKnown RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 UNC45AQ9H3U1 944 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 TBC1D22BQ9NU19 505 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 GINS2Q9Y248 185 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
LITAF-219ENST00000576334 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
LITAF-219ENST00000576334 NLRC5Q86WI3 1866 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 TMEM150BA6NC51 233 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 SLC37A4O43826 429 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 HBP1O60381 514 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 C22orf31O95567 290 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 FDPSP14324 419 aaKnown RBP13.46□□□□□ -0.25
LITAF-219ENST00000576334 POU3F3P20264 500 aaPredicted RBP13.46□□□□□ -0.25
LITAF-219ENST00000576334 USP11P51784 963 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 FOSBP53539 338 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 MCTP2Q6DN12 878 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 ZNF746Q6NUN9 644 aaPredicted RBP13.46□□□□□ -0.25
LITAF-219ENST00000576334 TSHZ1Q6ZSZ6 1077 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
LITAF-219ENST00000576334 APBB2Q92870 758 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 SLC5A5Q92911 643 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 YME1L1Q96TA2 773 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 SH2D3AQ9BRG2 576 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 CELF4Q9BZC1 486 aaKnown RBP13.46□□□□□ -0.25
LITAF-219ENST00000576334 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 DISC1Q9NRI5 854 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 PADI3Q9ULW8 664 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 TRPV2Q9Y5S1 764 aa13.46□□□□□ -0.25
LITAF-219ENST00000576334 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
LITAF-219ENST00000576334 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms