RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 FNIP1Q8TF40 1166 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 ALG3Q92685 438 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 PPP1R14AQ96A00 147 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 EMC9Q9Y3B6 208 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
KARSP3-201ENST00000571212 MEGF6O75095 1541 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 RTL1A6NKG5 1358 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 EIF5BO60841 1220 aaKnown RBP6.49□□□□□ -1.37
KARSP3-201ENST00000571212 PLS3P13797 630 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 PMLP29590 882 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 SCRN1Q12765 414 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 USP33Q8TEY7 942 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 APBA2Q99767 749 aa6.49□□□□□ -1.37
KARSP3-201ENST00000571212 ITGB4P16144 1822 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 SMAD7O15105 426 aaKnown RBP6.48□□□□□ -1.37
KARSP3-201ENST00000571212 FUCA1P04066 466 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 ATF4P18848 351 aaPredicted RBP6.48□□□□□ -1.37
KARSP3-201ENST00000571212 VWA3BQ502W6 1294 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 BVESQ8NE79 360 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 ZNF526Q8TF50 670 aaPredicted RBP6.48□□□□□ -1.37
KARSP3-201ENST00000571212 DPF3Q92784 378 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 COPS5Q92905 334 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 FAN1Q9Y2M0 1017 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
KARSP3-201ENST00000571212 NTRK1P04629 796 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 THBDP07204 575 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 NCAM1P13591 858 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 INF2Q27J81 1249 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 NBPF6Q5VWK0 638 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 GTF2IRD2BQ6EKJ0 949 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 GTF2IRD2Q86UP8 949 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 CABP7Q86V35 215 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 RAPGEF4Q8WZA2 1011 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 NBPF4Q96M43 638 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 PMF1-BGLAPU3KQ54 211 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 SMG6Q86US8 1419 aaKnown RBP6.47□□□□□ -1.37
KARSP3-201ENST00000571212 ATP10DQ9P241 1426 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 UBR3Q6ZT12 1888 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 KIF7Q2M1P5 1343 aa6.47□□□□□ -1.37
KARSP3-201ENST00000571212 C4BP0C0L5 1744 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 B2RBV5 119 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 TBX1O43435 398 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 SLURP1P55000 103 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 C6orf15Q6UXA7 325 aaPredicted RBP6.46□□□□□ -1.37
KARSP3-201ENST00000571212 SP8Q8IXZ3 490 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 NLGN1Q8N2Q7 840 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 MRGPRX3Q96LB0 322 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 NOX5Q96PH1 765 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 SYT3Q9BQG1 590 aa6.46□□□□□ -1.37
KARSP3-201ENST00000571212 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.37
KARSP3-201ENST00000571212 PCDH11XQ9BZA7 1347 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 PCDH11YQ9BZA8 1340 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 KIF20BQ96Q89 1820 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 ADCY9O60503 1353 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 INSRP06213 1382 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 KIF24Q5T7B8 1368 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 PALLDQ8WX93 1383 aa6.46□□□□□ -1.38
KARSP3-201ENST00000571212 FYB1O15117 783 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 NPHS1O60500 1241 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 RRS1Q15050 365 aaKnown RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 LARP1BQ659C4 914 aaKnown RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 WWC2Q6AWC2 1192 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 TRIM59Q8IWR1 403 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 SMARCC2Q8TAQ2 1214 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 PLEKHO2Q8TD55 490 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 TSPAN17Q96FV3 270 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 RNF38Q9H0F5 515 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 MARCH2Q9P0N8 246 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 STRIP2Q9ULQ0 834 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 MAP2P11137 1827 aaKnown RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 PKD1L3Q7Z443 1732 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 TOGARAM1Q9Y4F4 1720 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 NSD3Q9BZ95 1437 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 ARNTLO00327 626 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 NOP56O00567 594 aaKnown RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 SYN1P17600 705 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 HTRA3P83110 453 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 DLX2Q07687 328 aaPredicted RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 TEX2Q8IWB9 1127 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 NETO2Q8NC67 525 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 MICAL1Q8TDZ2 1067 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 BTN2A2Q8WVV5 523 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 PEX11GQ96HA9 241 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 SPATA25Q9BR10 227 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
KARSP3-201ENST00000571212 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 TMEFF2Q9UIK5 374 aaPredicted RBP6.45□□□□□ -1.38
KARSP3-201ENST00000571212 FLT4P35916 1363 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 GOLGB1Q14789 3259 aaKnown RBP6.44□□□□□ -1.38
KARSP3-201ENST00000571212 CYP27B1O15528 508 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 HSPA6P17066 643 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 ERCC5P28715 1186 aaPredicted RBP6.44□□□□□ -1.38
KARSP3-201ENST00000571212 ETFBP38117 255 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 KCNC1P48547 511 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 NCAPHQ15003 741 aa6.44□□□□□ -1.38
KARSP3-201ENST00000571212 SKOR2Q2VWA4 1001 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms