RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 USP11P51784 963 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 SETQ01105 290 aaPredicted RBP16.63■□□□□ 0.25
FANCA-220ENST00000566409 KRT40Q6A162 431 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 SWSAP1Q6NVH7 229 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 POTEBQ6S5H4 581 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 MYOCDQ8IZQ8 938 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 GJA10Q969M2 543 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
FANCA-220ENST00000566409 IFIH1Q9BYX4 1025 aaKnown RBP16.63■□□□□ 0.25
FANCA-220ENST00000566409 TBC1D22BQ9NU19 505 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 PCDHA2Q9Y5H9 948 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 MTCH2Q9Y6C9 303 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 CDY2AQ9Y6F7 541 aa16.63■□□□□ 0.25
FANCA-220ENST00000566409 TTC3P53804 2025 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 LINC01553A4QN01 128 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 BACH1O14867 736 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 MSH4O15457 936 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 AMHP03971 560 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 SLC26A2P50443 739 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 AK2P54819 239 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 MRPS6P82932 125 aaKnown RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 TMEM62Q0P6H9 643 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 FBXO47Q5MNV8 452 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 ZNF746Q6NUN9 644 aaPredicted RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 DAGLBQ8NCG7 672 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 TOP1MTQ969P6 601 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 AGO3Q9H9G7 860 aaKnown RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 ZNF302Q9NR11 478 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 GJB4Q9NTQ9 266 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
FANCA-220ENST00000566409 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
FANCA-220ENST00000566409 GRB10Q13322 594 aa16.61■□□□□ 0.25
FANCA-220ENST00000566409 MIS18BP1Q6P0N0 1132 aa16.61■□□□□ 0.25
FANCA-220ENST00000566409 PDXDC2PQ6P474 469 aa16.61■□□□□ 0.25
FANCA-220ENST00000566409 RSPH3Q86UC2 560 aa16.61■□□□□ 0.25
FANCA-220ENST00000566409 APBB2Q92870 758 aa16.61■□□□□ 0.25
FANCA-220ENST00000566409 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
FANCA-220ENST00000566409 CYP3A7-CYP3A51PA0A087WV96 503 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 HBP1O60381 514 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 UPP2O95045 317 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 LARGE1O95461 756 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 TDP2O95551 362 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 CYP3A7P24462 503 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 KLRC1P26715 233 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 ERVK-21P61565 698 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 KRT76Q01546 638 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 FAM160B1Q5W0V3 765 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
FANCA-220ENST00000566409 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
FANCA-220ENST00000566409 SLC5A5Q92911 643 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 TNPO1Q92973 898 aaKnown RBP16.6■□□□□ 0.25
FANCA-220ENST00000566409 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 MTUS1Q9ULD2 1270 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 PCDHA10Q9Y5I2 948 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 NLRC5Q86WI3 1866 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 MYO7AQ13402 2215 aa16.6■□□□□ 0.25
FANCA-220ENST00000566409 SMIM35A0A1B0GVV1 85 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 ENPP3O14638 875 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 ZNF862O60290 1169 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 FDPSP14324 419 aaKnown RBP16.59■□□□□ 0.25
FANCA-220ENST00000566409 CD52P31358 61 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 ME3Q16798 604 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 Q4G0T1 1027 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 IER5Q5VY09 327 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 GALNT17Q6IS24 598 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 RTN4RL1Q86UN2 441 aaPredicted RBP16.59■□□□□ 0.25
FANCA-220ENST00000566409 SMAP1Q8IYB5 467 aaPredicted RBP16.59■□□□□ 0.25
FANCA-220ENST00000566409 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
FANCA-220ENST00000566409 LINC01599Q8WXQ3 324 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 MBOAT7Q96N66 472 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 CDHR5Q9HBB8 845 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 GABBR1Q9UBS5 961 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
FANCA-220ENST00000566409 PSMD10O75832 226 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 CDKL5O76039 1030 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 C22orf31O95567 290 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 PSAPP07602 524 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 B3GNT9Q6UX72 402 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 TSHZ1Q6ZSZ6 1077 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.24
FANCA-220ENST00000566409 MICALL1Q8N3F8 863 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 NME8Q8N427 588 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 OXER1Q8TDS5 423 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 GDPD5Q8WTR4 605 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
FANCA-220ENST00000566409 TGS1Q96RS0 853 aaKnown RBP16.58■□□□□ 0.24
FANCA-220ENST00000566409 RIT2Q99578 217 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 C17orf80Q9BSJ5 609 aa16.58■□□□□ 0.24
FANCA-220ENST00000566409 CELF4Q9BZC1 486 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms