RNA–Protein interactions for RNA: ENST00000565958.1

CCNDBP1-207, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-207ENST00000565958 VPS72Q15906 364 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 FIGNQ5HY92 759 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 HABP4Q5JVS0 413 aaKnown RBP6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 EFCAB2Q5VUJ9 269 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 HLA-DQA1Q5Y7H0 255 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 FSTL4Q6MZW2 842 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 TSHZ1Q6ZSZ6 1077 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 TIFAQ96CG3 184 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 ZDHHC5Q9C0B5 715 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 SEMA3GQ9NS98 782 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 SMG5Q9UPR3 1016 aaKnown RBP6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 COA3Q9Y2R0 106 aaPredicted RBP6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA9Q9Y5G4 932 aaKnown RBP6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA8Q9Y5G5 932 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA7Q9Y5G6 932 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA6Q9Y5G7 932 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA3Q9Y5H0 932 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 PCDHGA2Q9Y5H1 932 aa6.51□□□□□ -1.37
CCNDBP1-207ENST00000565958 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 MAN2B1O00754 1011 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 ASGR2P07307 311 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 GPR3P46089 330 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 GBX1Q14549 363 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 CLUL1Q15846 466 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 LONRF3Q496Y0 759 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 OTOP3Q7RTS5 596 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 TEX2Q8IWB9 1127 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 CMIPQ8IY22 773 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 TMEM52Q8NDY8 209 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 LMBR1Q8WVP7 490 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 CCDC120Q96HB5 630 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 LRGUKQ96M69 825 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 SARGQ9BW04 601 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 MS4A5Q9H3V2 200 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 PARD6AQ9NPB6 346 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 ANLNQ9NQW6 1124 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 C19orf73Q9NVV2 129 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 GULP1Q9UBP9 304 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 SRPK3Q9UPE1 567 aa6.5□□□□□ -1.37
CCNDBP1-207ENST00000565958 TCRBV5S4A2TA0A5A2 114 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 C22orf46C9J442 243 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 ETV2O00321 342 aaPredicted RBP6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 CREB3O43889 395 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 DGKIO75912 1065 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 NBPF7P0C2Y1 421 aaPredicted RBP6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 COL6A2P12110 1019 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 CD40P25942 277 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 HTRA3P83110 453 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 ACAP2Q15057 778 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 ARHGAP29Q52LW3 1261 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 FRMD7Q6ZUT3 714 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 ZZZ3Q8IYH5 903 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 TEKT5Q96M29 485 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 CARS2Q9HA77 564 aaKnown RBP6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 SP110Q9HB58 689 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 ACSS2Q9NR19 701 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 B3GALT1Q9Y5Z6 326 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 X6R8D5 127 aa6.49□□□□□ -1.37
CCNDBP1-207ENST00000565958 SCDO00767 359 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 ESR1P03372 595 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 CYP17A1P05093 508 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 IFIT2P09913 472 aaKnown RBP6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 HSPA6P17066 643 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 PTX3P26022 381 aaPredicted RBP6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 LINC00310P59036 64 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 PICALMQ13492 652 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 GRM3Q14832 879 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 ESRP1Q6NXG1 681 aaKnown RBP6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 TTLL7Q6ZT98 887 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 PJA1Q8NG27 643 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 PIP4K2CQ8TBX8 421 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 SH3RF2Q8TEC5 729 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 KCNN1Q92952 543 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 ACAP3Q96P50 834 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 ATP13A1Q9HD20 1204 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 TNFRSF10DQ9UBN6 386 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 USP25Q9UHP3 1055 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 DSEQ9UL01 958 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 ZNF281Q9Y2X9 895 aa6.48□□□□□ -1.37
CCNDBP1-207ENST00000565958 KRIT1O00522 736 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 CLASP2O75122 1294 aaKnown RBP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 ZRANB2O95218 330 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 CEBPAP49715 358 aaPredicted RBP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 PDCD1Q15116 288 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 CPZQ66K79 652 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 CC2D1AQ6P1N0 951 aaPredicted RBP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 RIOX2Q8IUF8 465 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 NLGN4XQ8N0W4 816 aa6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 UHMK1Q8TAS1 419 aaKnown RBP6.47□□□□□ -1.37
CCNDBP1-207ENST00000565958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms