RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 C15orf52Q6ZUT6 534 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 GALNT15Q8N3T1 639 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 CERS5Q8N5B7 392 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 MDM1Q8TC05 714 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 TLR10Q9BXR5 811 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 AGAP1Q9UPQ3 857 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 PCDHA13Q9Y5I0 950 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 NFS1Q9Y697 457 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 LAMB1P07942 1786 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 TRIM49BA6NDI0 452 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 SRGNP10124 158 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 NQO1P15559 274 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 KIF5BP33176 963 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 MCM7P33993 719 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 MKRN4PQ13434 485 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 ANKRD13CQ8N6S4 541 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 PCMTD1Q96MG8 357 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 SWAP70Q9UH65 585 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 A8MUI8 341 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 CYTH3O43739 400 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 RNF8O76064 485 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 UAP1Q16222 522 aaPredicted RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 KCNV2Q8TDN2 545 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 TEKT4Q8WW24 435 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 EYA3Q99504 573 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 MAD2L2Q9UI95 211 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 DAGLAQ9Y4D2 1042 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 MYH10P35580 1976 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 RASSF10A6NK89 507 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 MAP3K13O43283 966 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 ZBED6P86452 979 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 PTGDRQ13258 359 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 PFKFB3Q16875 520 aaPredicted RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 ARHGAP22Q7Z5H3 698 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 DGKHQ86XP1 1220 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 FAM205AQ6ZU69 1335 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 LRRD1A4D1F6 860 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 ATP2A2P16615 1042 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 TNFRSF25Q93038 417 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 TTYH3Q9C0H2 523 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 GDAQ9Y2T3 454 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 ATP6V0A2Q9Y487 856 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 MAST2Q6P0Q8 1798 aa15.3■□□□□ 0.04
GTF3C1-203ENST00000562609 H7C1D1 291 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 KLRG2A4D1S0 409 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 PRCPP42785 496 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 DPP8Q6V1X1 898 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 TRPM8Q7Z2W7 1104 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 NLGN1Q8N2Q7 840 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 FAM81AQ8TBF8 368 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 UBLCP1Q8WVY7 318 aaPredicted RBP15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 CEP95Q96GE4 821 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 GORASP1Q9BQQ3 440 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 C2CD2Q9Y426 696 aa15.29■□□□□ 0.04
GTF3C1-203ENST00000562609 G3V3G9 751 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 RAD51CO43502 376 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 PPFIA2O75334 1257 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 DNM2P50570 870 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 ERMARDQ5T6L9 678 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 HOMEZQ8IX15 550 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 TEX9Q8N6V9 391 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 STK38LQ9Y2H1 464 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 BUB1O43683 1085 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 TUBP50607 506 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 CACNB3P54284 484 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 PDIA5Q14554 519 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 AGBL2Q5U5Z8 902 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 NUGGCQ68CJ6 796 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 KLHL7Q8IXQ5 586 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 EEF2KMTQ96G04 330 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 ABCF3Q9NUQ8 709 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 SRCAPQ6ZRS2 3230 aa15.28■□□□□ 0.04
GTF3C1-203ENST00000562609 IGF2BP3O00425 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 ITIH4Q14624 930 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 KLHDC7AQ5VTJ3 777 aa15.27■□□□□ 0.04
GTF3C1-203ENST00000562609 ZFAND2BQ8WV99 257 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms