RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 EPOPA6NHQ4 379 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 ZBBXA8MT70 800 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 FAM86B1E9PN63 330 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 ADAMTS3O15072 1205 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 DHX15O43143 795 aaKnown RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 EDIL3O43854 480 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 LPXNO60711 386 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 RPLP2P05387 115 aaKnown RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 CA3P07451 260 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 FAM86B2P0C5J1 330 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 MYOGP15173 224 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 CIITAP33076 1130 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 ARHGAP4P98171 946 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 NPY5RQ15761 445 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 KLHL40Q2TBA0 621 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 MARCH8Q5T0T0 291 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 MCTP2Q6DN12 878 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 TAF2Q6P1X5 1199 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 Q6ZUG5 572 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 CCDC82Q8N4S0 544 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 SEPT1Q8WYJ6 367 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 SPOCK2Q92563 424 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 ATP6V0A1Q93050 837 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 COL25A1Q9BXS0 654 aaPredicted RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 OSBPL7Q9BZF2 842 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 SLKQ9H2G2 1235 aaPredicted RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 PRDM12Q9H4Q4 367 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 SLC28A3Q9HAS3 691 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 AGO4Q9HCK5 861 aaKnown RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 JPH1Q9HDC5 661 aaPredicted RBP7.84□□□□□ -1.15
SPG11-224ENST00000561268 ERAP1Q9NZ08 941 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 SLC9A2Q9UBY0 812 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 MYH11P35749 1972 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 COL1A2P08123 1366 aa7.84□□□□□ -1.16
SPG11-224ENST00000561268 PDCD11Q14690 1871 aaKnown RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 STK36Q9NRP7 1315 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 LCHNA4D1U4 455 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SMCO2A6NFE2 343 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 RSPH10B2B2RC85 870 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 M0R2N6 131 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SORBS3O60504 671 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 CCNE2O96020 404 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 LINC00271P0C7V0 271 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 RSPH10BP0C881 870 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 ARP10275 920 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 GNAT1P11488 350 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 PSMA5P28066 241 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 PDIA3P30101 505 aaKnown RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 KCNJ6P48051 423 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SLC26A2P50443 739 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SETQ01105 290 aaPredicted RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 RUFY3Q7L099 469 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 PLPPR4Q7Z2D5 763 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SPRED2Q7Z698 418 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 REXO1Q8N1G1 1221 aaKnown RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 CRIPAKQ8N1N5 446 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 DAGLBQ8NCG7 672 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 CCDC148Q8NFR7 591 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 DBF4BQ8NFT6 615 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 CYP2W1Q8TAV3 490 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 CCDC12Q8WUD4 166 aaPredicted RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 APBB2Q92870 758 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 PGBD1Q96JS3 809 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SMARCAD1Q9H4L7 1026 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SH3GLB2Q9NR46 395 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SETD4Q9NVD3 440 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 TUBE1Q9UJT0 475 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 SQORQ9Y6N5 450 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
SPG11-224ENST00000561268 MYH15Q9Y2K3 1946 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 A0A0C4DFX4 3053 aa7.83□□□□□ -1.16
SPG11-224ENST00000561268 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 LINC01553A4QN01 128 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 ZBTB42B2RXF5 422 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 CHRNA1P02708 482 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 THPOP40225 353 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 ACTR2P61160 394 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 ERVK-21P61565 698 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 PPFIA1Q13136 1202 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 GRIK4Q16099 956 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 B3GNT9Q6UX72 402 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 ABHD15Q6UXT9 468 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 FAM43BQ6ZT52 329 aaPredicted RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 CCDC60Q8IWA6 550 aaPredicted RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 TNPO1Q92973 898 aaKnown RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 ZNF274Q96GC6 653 aaPredicted RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 INTS4Q96HW7 963 aaKnown RBP7.82□□□□□ -1.16
SPG11-224ENST00000561268 MBOAT7Q96N66 472 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 FTOQ9C0B1 505 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPG11-224ENST00000561268 TMEM260Q9NX78 707 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 THEGQ9P2T0 379 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 MTCH2Q9Y6C9 303 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 TRIP11Q15643 1979 aa7.82□□□□□ -1.16
SPG11-224ENST00000561268 SMIM35A0A1B0GVV1 85 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 RRN3P2A6NIE6 340 aa7.81□□□□□ -1.16
SPG11-224ENST00000561268 DLL1O00548 723 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms