RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 PSMC5P62195 406 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 IGBP1P78318 339 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 PRKCEQ02156 737 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 PDIA5Q14554 519 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 FOXD4L5Q5VV16 416 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 TRAPPC12Q8WVT3 735 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 FOXD4L4Q8WXT5 416 aaPredicted RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 BADQ92934 168 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 DYDC2Q96IM9 177 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 EIF2AK1Q9BQI3 630 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 PPP1R12CQ9BZL4 782 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 HIPK3Q9H422 1215 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 NRBP2Q9NSY0 501 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 WDR81Q562E7 1941 aa13.42□□□□□ -0.26
RABGGTA-218ENST00000560777 KAT6AQ92794 2004 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 OATP04181 439 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 KLRC1P26715 233 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 CTTNQ14247 550 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 SF3A1Q15459 793 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 XKR3Q5GH77 459 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 ZNF484Q5JVG2 852 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 DTHD1Q6ZMT9 781 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 TPH2Q8IWU9 490 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 WNT8AQ9H1J5 351 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
RABGGTA-218ENST00000560777 TMEM150BA6NC51 233 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 ZBTB39O15060 712 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 F13A1P00488 732 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 SPATA31C1P0DKV0 1188 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 CKBP12277 381 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 CCL23P55773 120 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 RBL2Q08999 1139 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 BFSP2Q13515 415 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 PTPAQ15257 358 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 TARBP2Q15633 366 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 PRPF38BQ5VTL8 546 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 ARL6IP4Q66PJ3 421 aaKnown RBP13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 ANO5Q75V66 913 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 CAGE1Q8TC20 777 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 GDF15Q99988 308 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 LXNQ9BS40 222 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 ZSWIM4Q9H7M6 989 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 TUBE1Q9UJT0 475 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.26
RABGGTA-218ENST00000560777 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 MED24O75448 989 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 LYPLA2O95372 231 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 BRD1O95696 1058 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 BMP15O95972 392 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 CSF2RAP15509 400 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 CEBPZQ03701 1054 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 GPNMBQ14956 572 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 SCLYQ96I15 445 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 SH2D3AQ9BRG2 576 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 POLR3CQ9BUI4 534 aaPredicted RBP13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 COL1A2P08123 1366 aa13.39□□□□□ -0.27
RABGGTA-218ENST00000560777 A0A087WWV3 80 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 VWA3AA6NCI4 1184 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 C22orf31O95567 290 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 SELPP16109 830 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 RPA1P27694 616 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 CDC25AP30304 524 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 YWHABP31946 246 aaKnown RBP13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 THPOP40225 353 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 EPHB4P54760 987 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 C16orf59Q7L2K0 433 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 TMEM199Q8N511 208 aa13.38□□□□□ -0.27
RABGGTA-218ENST00000560777 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms