RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 C5orf22Q49AR2 442 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 ANKRD39Q53RE8 183 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 ODF2Q5BJF6 829 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 USPL1Q5W0Q7 1092 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 CRTC1Q6UUV9 634 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 BTNL9Q6UXG8 535 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 FAM196AQ6ZSG2 479 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 RAPH1Q70E73 1250 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 RSPH3Q86UC2 560 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 SAPCD2Q86UD0 394 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 KCT2Q8NC54 265 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 CPLX3Q8WVH0 158 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 HDAC2Q92769 488 aaKnown RBP5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 CENPOQ9BU64 300 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 SLC13A1Q9BZW2 595 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 LMAN2LQ9H0V9 348 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 BRD9Q9H8M2 597 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 FANCFQ9NPI8 374 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 PAPOLBQ9NRJ5 636 aaKnown RBP5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 RAD18Q9NS91 495 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 SEPT11Q9NVA2 429 aaKnown RBP5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 HPF1Q9NWY4 346 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 SAGE1Q9NXZ1 904 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 SUFUQ9UMX1 484 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 ATP11BQ9Y2G3 1177 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 MTF2Q9Y483 593 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 PCDHGC5Q9Y5F6 944 aa5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 BRD4O60885 1362 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P26-201ENST00000560051 FAM170BA6NMN3 283 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 AKR1B15C9JRZ8 316 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 EIF1AYO14602 144 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 APAF1O14727 1248 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 P4HA2O15460 535 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 MAFKO60675 156 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TNFRSF21O75509 655 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PALMO75781 387 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SASH1O94885 1247 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 MBD4O95243 580 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 EYA4O95677 639 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 APBB3O95704 486 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 CYP17A1P05093 508 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 VIMP08670 466 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TNNT1P13805 278 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TRIM21P19474 475 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 CAPN3P20807 821 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 GARTP22102 1010 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 S100A5P33763 92 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 GALNSP34059 522 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PMS1P54277 932 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PDE4BQ07343 736 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 KIF5AQ12840 1032 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PPP2R5CQ13362 524 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TCIRG1Q13488 830 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SEPT6Q14141 434 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 COG2Q14746 738 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SAFBQ15424 915 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 VPS53Q5VIR6 699 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 HGSNATQ68CP4 663 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TRIM68Q6AZZ1 485 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 FCRLBQ6BAA4 426 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PI16Q6UXB8 463 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PACS1Q6VY07 963 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 GBP6Q6ZN66 633 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SPATC1Q76KD6 591 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 STRA8Q7Z7C7 330 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZBTB46Q86UZ6 589 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 MYLK4Q86YV6 388 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 CARNMT1Q8N4J0 409 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 FAM169BQ8N8A8 192 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 GBP7Q8N8V2 638 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 C2CD4AQ8NCU7 369 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 FBXO30Q8TB52 745 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 GOLGA5Q8TBA6 731 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 DDX54Q8TDD1 881 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 ACMSDQ8TDX5 336 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 EZH1Q92800 747 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 NRBF2Q96F24 287 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 BICD1Q96G01 975 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SHDQ96IW2 340 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 EPSTI1Q96J88 318 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 SPATA17Q96L03 361 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 DHRS1Q96LJ7 313 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 TSGA13Q96PP4 275 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 HHIPQ96QV1 700 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 NOL10Q9BSC4 688 aaKnown RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 YIPF4Q9BSR8 244 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 ISCA1Q9BUE6 129 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 NACA2Q9H009 215 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 VCX3BQ9H321 246 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 VPS37BQ9H9H4 285 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 INCENPQ9NQS7 918 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PAK6Q9NQU5 681 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 BLOC1S4Q9NUP1 217 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 ABCF3Q9NUQ8 709 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PDP2Q9P2J9 529 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 PFDN2Q9UHV9 154 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 MAPK8IP1Q9UQF2 711 aa5.03□□□□□ -1.6
HMGB3P26-201ENST00000560051 C2CD2Q9Y426 696 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms