RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ZNF229Q9UJW7 825 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 OPTNQ96CV9 577 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 TTC21AQ8NDW8 1320 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 CCDC14Q49A88 953 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 BLIDQ8IZY5 108 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 REXO4Q9GZR2 422 aaKnown RBP3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ENO1P06733 434 aaKnown RBP3.96□□□□□ -1.78
ATXN3-248ENST00000558190 CD19P15391 556 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF618Q5T7W0 954 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 TSHZ1Q6ZSZ6 1077 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 NANOGNBQ7Z5D8 188 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 MTERF3Q96E29 417 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 KLHL4Q9C0H6 718 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 DDX47Q9H0S4 455 aaKnown RBP3.96□□□□□ -1.78
ATXN3-248ENST00000558190 IL13P35225 146 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 EXOSC10Q01780 885 aaKnown RBP3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ARL6IP4Q66PJ3 421 aaKnown RBP3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ZBTB49Q6ZSB9 765 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 CROCCP3Q8IVE0 287 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 PPM1NQ8N819 430 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 KCNQ3O43525 872 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 CLEC4GQ6UXB4 293 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ZNF280CQ8ND82 737 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 MTBPQ96DY7 904 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 HAUS7Q99871 368 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 SERPINB4P48594 390 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 ATP6V1E2Q96A05 226 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 UBN1Q9NPG3 1134 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 EMILIN3Q9NT22 766 aa3.96□□□□□ -1.78
ATXN3-248ENST00000558190 KRT37O76014 449 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 S100BP04271 92 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MCL1Q07820 350 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SHC4Q6S5L8 630 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 STKLD1Q8NE28 680 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 KCNJ1P48048 391 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 CCZ1BP86790 482 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 CCZ1P86791 482 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SPICE1Q8N0Z3 855 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ANKRD27Q96NW4 1050 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PTGES3LE9PB15 166 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DDHD2O94830 711 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TNNI1P19237 187 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SLC34A1Q06495 639 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PARP3Q9Y6F1 533 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DGKIO75912 1065 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 GPBP1Q86WP2 473 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PLD3Q8IV08 490 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PASKQ96RG2 1323 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 FMN1Q68DA7 1419 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PEX1O43933 1283 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 XRCC5P13010 732 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MAGEA4P43358 317 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 OMA1Q96E52 524 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PRKAB2O43741 272 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 GLI1P08151 1106 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ITKQ08881 620 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TTC33Q6PID6 262 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 CENPUQ71F23 418 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 METTL22Q9BUU2 404 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 HERC5Q9UII4 1024 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ZBED4O75132 1171 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DLGAP3O95886 979 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MYBL1P10243 752 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 NONOQ15233 471 aaKnown RBP eCLIP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PI4K2BG5E9Z4 385 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PRAMEP78395 509 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MRPS15P82914 257 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 INAQ16352 499 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SSH3Q8TE77 659 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC42Q9Y546 428 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 AP4S1Q9Y587 144 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PCDHB4Q9Y5E5 795 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 DNALI1O14645 258 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ATP6V1G2O95670 118 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PAX3P23760 479 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PHACTR1Q9C0D0 580 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 USP40Q9NVE5 1235 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MAP3K19Q56UN5 1328 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SOX11P35716 441 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PPARAQ07869 468 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ZBTB41Q5SVQ8 909 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 ZCCHC7Q8N3Z6 543 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 TGS1Q96RS0 853 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SFMBT1Q9UHJ3 866 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PSEN1P49768 467 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PDIA2Q13087 525 aaKnown RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 LRRC8BQ6P9F7 803 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MAML1Q92585 1016 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 CNBD2Q96M20 576 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 AIFM3Q96NN9 605 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 KLF6Q99612 283 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 CHKBQ9Y259 395 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 SMNDC1O75940 238 aaKnown RBP eCLIP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 NUP107P57740 925 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 GPS1Q13098 491 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 MTHFD1LQ6UB35 978 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PDZD4Q76G19 769 aaPredicted RBP3.95□□□□□ -1.78
ATXN3-248ENST00000558190 RRN3Q9NYV6 651 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 RTEL1-TNFRSF6BF6WH68 1400 aa3.95□□□□□ -1.78
ATXN3-248ENST00000558190 PPP1R3GB7ZBB8 358 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms