RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 PPFIA4O75335 1185 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 AMHP03971 560 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 HOXD8P13378 290 aaPredicted RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 CHMLP26374 656 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 GPM6BQ13491 265 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 AAK1Q2M2I8 961 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 PAN2Q504Q3 1202 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 PLEKHG4Q58EX7 1191 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 TMEM31Q5JXX7 168 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 TTC22Q5TAA0 569 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 TRMT1LQ7Z2T5 733 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 TMEM192Q8IY95 271 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 LMBR1Q8WVP7 490 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 EMID1Q96A84 441 aaPredicted RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 TCEANC2Q96MN5 208 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 YME1L1Q96TA2 773 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 IFIH1Q9BYX4 1025 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 FAM49AQ9H0Q0 323 aaPredicted RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 OSBPL3Q9H4L5 887 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 RIOX1Q9H6W3 641 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 ALG13Q9NP73 1137 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 HCSTQ9UBK5 93 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 COG5Q9UP83 839 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 MICAL3Q7RTP6 2002 aa7.9□□□□□ -1.15
PRPF40B-214ENST00000551320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 SPATA31C2B4DYI2 1134 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 PCP11498 1178 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 DNAJB1P25685 340 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 CTNNB1P35222 781 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 HTRA4P83105 476 aaPredicted RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 RBL2Q08999 1139 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 TROAPQ12815 778 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 WTAPQ15007 396 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 TMEM266Q2M3C6 531 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 ALYREFQ86V81 257 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 FAM178BQ8IXR5 827 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 GJD3Q8N144 294 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 SRBD1Q8N5C6 995 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 SMARCC2Q8TAQ2 1214 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 CYP2W1Q8TAV3 490 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 IGDCC4Q8TDY8 1250 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 DNAJB3Q8WWF6 145 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 LINC01599Q8WXQ3 324 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 ZNF516Q92618 1163 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 SPSB2Q99619 263 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 KATNAL1Q9BW62 490 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 AGO3Q9H9G7 860 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 CLDND1Q9NY35 253 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 CTNNA3Q9UI47 895 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 INSL6Q9Y581 213 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 SIP14410 1827 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 PIEZO1Q92508 2521 aa7.89□□□□□ -1.15
PRPF40B-214ENST00000551320 ATG2AQ2TAZ0 1938 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 GSTTP1A0A1W2PQM5 241 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 MEIS2O14770 477 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 LINC00271P0C7V0 271 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 ITGB5P18084 799 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 CD52P31358 61 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 IRS1P35568 1242 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 TCF7P36402 384 aaPredicted RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 LTBRP36941 435 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 LPIN1Q14693 890 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 MARCH8Q5T0T0 291 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 ADGRD2Q7Z7M1 963 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 RBM23Q86U06 439 aaKnown RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 RTN4RL1Q86UN2 441 aaPredicted RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 MB21D2Q8IYB1 491 aaPredicted RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 ZNF654Q8IZM8 581 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 SEPT8Q92599 483 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 TOP1MTQ969P6 601 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 MRPL38Q96DV4 380 aaKnown RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 INPP4AQ96PE3 977 aaPredicted RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 PCYT2Q99447 389 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 C1QTNF1Q9BXJ1 281 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 CNNM2Q9H8M5 875 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 LY9Q9HBG7 655 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 TMEM260Q9NX78 707 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 PNMA2Q9UL42 364 aa7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 RBM8AQ9Y5S9 174 aaKnown RBP7.88□□□□□ -1.15
PRPF40B-214ENST00000551320 PI4K2BG5E9Z4 385 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 H3BNC9 293 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 DDX39AO00148 427 aaKnown RBP7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 ENPP3O14638 875 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 PRC1O43663 620 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 DTNBO60941 627 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 KCNA2P16389 499 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 SP100P23497 879 aaPredicted RBP7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 HOXC8P31273 242 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 ADAM17P78536 824 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 GHRHRQ02643 423 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 HYAL1Q12794 435 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 TRDNQ13061 729 aa7.87□□□□□ -1.15
PRPF40B-214ENST00000551320 PPFIA1Q13136 1202 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms