RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ERAP1Q9NZ08 941 aa18.27■□□□□ 0.52
LIMS2-217ENST00000545738 KPNA6O60684 536 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 RPA1P27694 616 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 ME1P48163 572 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 PSMC5P62195 406 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 ZNF200P98182 395 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-217ENST00000545738 GRB10Q13322 594 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 ITGA7Q13683 1181 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 SLC43A3Q8NBI5 491 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 CEP89Q96ST8 783 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 PLIN2Q99541 437 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 POLR3CQ9BUI4 534 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-217ENST00000545738 SCAND2PQ9GZW5 306 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-217ENST00000545738 HDAC6Q9UBN7 1215 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 SMIM10L2AP0DMW4 78 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 SMIM10L2BP0DMW5 78 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 HOXC8P31273 242 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
LIMS2-217ENST00000545738 PLA2G4FQ68DD2 849 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 PIGOQ8TEQ8 1089 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 AK8Q96MA6 479 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
LIMS2-217ENST00000545738 OATP04181 439 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 CCT6AP40227 531 aaKnown RBP18.25■□□□□ 0.51
LIMS2-217ENST00000545738 CDK7P50613 346 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 HYIQ5T013 277 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 MARCH8Q5T0T0 291 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 FAM160B1Q5W0V3 765 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 SLC39A5Q6ZMH5 540 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 CLEC17AQ6ZS10 378 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 CABP7Q86V35 215 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 C4orf19Q8IY42 314 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 ATP8B4Q8TF62 1192 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 SETD4Q9NVD3 440 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 ZNF215Q9UL58 517 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-217ENST00000545738 LAMA2P24043 3122 aaKnown RBP18.25■□□□□ 0.51
LIMS2-217ENST00000545738 KAT6AQ92794 2004 aa18.25■□□□□ 0.51
LIMS2-217ENST00000545738 CUTAO60888 179 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 CABYRO75952 493 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 INSRRP14616 1297 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 NPEPPSP55786 919 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 ADAM17P78536 824 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 SNX17Q15036 470 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 ZRSR1Q15695 479 aaKnown RBP18.24■□□□□ 0.51
LIMS2-217ENST00000545738 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-217ENST00000545738 LMBR1Q8WVP7 490 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 ATP6V0A1Q93050 837 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 VTI1AQ96AJ9 217 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 RAB34Q9BZG1 259 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 ZSWIM4Q9H7M6 989 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 TUFT1Q9NNX1 390 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 DDX19AQ9NUU7 478 aaKnown RBP18.24■□□□□ 0.51
LIMS2-217ENST00000545738 KIAA1024Q9UPX6 916 aa18.24■□□□□ 0.51
LIMS2-217ENST00000545738 RANBP2P49792 3224 aaKnown RBP18.24■□□□□ 0.51
LIMS2-217ENST00000545738 GADD45BO75293 160 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 LYPLA2O95372 231 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 YWHABP31946 246 aaKnown RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 TMEM119Q4V9L6 283 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 KRT79Q5XKE5 535 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 HAUS3Q68CZ6 603 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 NECAB2Q7Z6G3 386 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 WNT8BQ93098 351 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 KATNAL1Q9BW62 490 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 CCSER1Q9C0I3 900 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 GOLPH3LQ9H4A5 285 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 TRMT13Q9NUP7 481 aaKnown RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 GTF2IRD1Q9UHL9 959 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 TRPC6Q9Y210 931 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 EVPLQ92817 2033 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 A0A0U1RQG5 324 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 E9PMD0 336 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 ARVCFO00192 962 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 SLC26A2P50443 739 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 TARBP2Q15633 366 aaKnown RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 NAALADL2Q58DX5 795 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 RESP18Q5W5W9 173 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 ERMNQ8TAM6 284 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 BBXQ8WY36 941 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 PANK2Q9BZ23 570 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 BLOC1S4Q9NUP1 217 aa18.23■□□□□ 0.51
LIMS2-217ENST00000545738 SEPT9Q9UHD8 586 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-217ENST00000545738 B4GALT4O60513 344 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 PLCG1P19174 1290 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 UBA7P41226 1012 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 IGBP1P78318 339 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 PPFIA1Q13136 1202 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 GRIK4Q16099 956 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 FAM47CQ5HY64 1035 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 ADALQ6DHV7 355 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 SESTD1Q86VW0 696 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 FAM126BQ8IXS8 530 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 TRPV6Q9H1D0 765 aa18.22■□□□□ 0.51
LIMS2-217ENST00000545738 A0A1B0GVL5 298 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms