RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 SFR1Q86XK3 245 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 TPH2Q8IWU9 490 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 CABS1Q96KC9 395 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 RHOXF2Q9BQY4 288 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
USP35-207ENST00000530546 CIITAP33076 1130 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 LRCH2Q5VUJ6 765 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 PCDHA2Q9Y5H9 948 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 COL4A3BPQ9Y5P4 624 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 PIK3CDO00329 1044 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 ZBTB39O15060 712 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 GIT2Q14161 759 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 ZCWPW2Q504Y3 356 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 CCDC122Q5T0U0 273 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 SIK3Q9Y2K2 1263 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 MRPL11Q9Y3B7 192 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 ASTN2O75129 1339 aaPredicted RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 CCDC189A1A4V9 331 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 CYLC1P35663 651 aaPredicted RBP12.69□□□□□ -0.38
USP35-207ENST00000530546 CCT5P48643 541 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 FAM83AQ86UY5 434 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 FAM76AQ8TAV0 307 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 DYDC2Q96IM9 177 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 RUSC1Q9BVN2 902 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 NLRC4Q9NPP4 1024 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 HPCAL4Q9UM19 191 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 GJA3Q9Y6H8 435 aa12.69□□□□□ -0.38
USP35-207ENST00000530546 ASNSP08243 561 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 CYP3A4P08684 503 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 MYBP10242 640 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 APBA1Q02410 837 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 ADAM9Q13443 819 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 NEDD9Q14511 834 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 CACNA2D4Q7Z3S7 1137 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 SPATS2Q86XZ4 545 aaKnown RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 CCDC42Q96M95 316 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 RGPD3A6NKT7 1758 aaPredicted RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 A6NNZ2 444 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 ENC1O14682 589 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 GAS7O60861 476 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 ABCB11O95342 1321 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 ARP10275 920 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 TRAF1Q13077 416 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 MEA1Q16626 185 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 TBC1D10BQ4KMP7 808 aaPredicted RBP12.68□□□□□ -0.38
USP35-207ENST00000530546 FKBP1CQ5VVH2 108 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 RGPD4Q7Z3J3 1758 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 JAKMIP2Q96AA8 810 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
USP35-207ENST00000530546 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 TBC1D12O60347 775 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
USP35-207ENST00000530546 IRAK1P51617 712 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 PPFIA1Q13136 1202 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 LACRTQ9GZZ8 138 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 LRRC53A6NM62 1247 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 KRT83P78385 493 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 OTOP1Q7RTM1 612 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 COG1Q8WTW3 980 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 ZNF577Q9BSK1 485 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
USP35-207ENST00000530546 DUSP10Q9Y6W6 482 aa12.67□□□□□ -0.38
USP35-207ENST00000530546 MACROD2A1Z1Q3 448 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 TMCO5BA8MYB1 307 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 GCNT3O95395 438 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 ALAS1P13196 640 aa12.66□□□□□ -0.38
USP35-207ENST00000530546 NR2F2P24468 414 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms