RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 SFSWAPQ12872 951 aaKnown RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 MTX1Q13505 466 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 DOC2BQ14184 412 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 IQSEC1Q6DN90 963 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 KIAA1211Q6ZU35 1233 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 ADHFE1Q8IWW8 467 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 CEP120Q8N960 986 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 ZNF417Q8TAU3 575 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 NEK9Q8TD19 979 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.49□□□□□ -1.37
CHKA-204ENST00000528235 DYNLL2Q96FJ2 89 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 CEP63Q96MT8 703 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 ZNF587Q96SQ5 575 aaPredicted RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 RAD9AQ99638 391 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 RAVER2Q9HCJ3 691 aaKnown RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 BRD7Q9NPI1 651 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 FAM86C1Q9NVL1 165 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 MUTYHQ9UIF7 546 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 NOB1Q9ULX3 412 aaKnown RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 GNEQ9Y223 722 aaKnown RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 Q9Y3F1 56 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 SUPT16HQ9Y5B9 1047 aaKnown RBP6.49□□□□□ -1.37
CHKA-204ENST00000528235 FAM186AA6NE01 2351 aa6.49□□□□□ -1.37
CHKA-204ENST00000528235 LINC01553A4QN01 128 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 USP17L12C9JPN9 530 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 USP17L21D6R901 530 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 ATP2A1O14983 1001 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 ATP9BO43861 1147 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 GNAI2P04899 355 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CYP2D6P10635 497 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CDK8P49336 464 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CPT1AP50416 773 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CHMP4BP1P59074 171 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 WDR5P61964 334 aaKnown RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 CLDN10P78369 228 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CNTN2Q02246 1040 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 HIF1AQ16665 826 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 LRRFIP1Q32MZ4 808 aaKnown RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 TIGD5Q53EQ6 642 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 HERC4Q5GLZ8 1057 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 FAM117BQ6P1L5 589 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 EEPD1Q7L9B9 569 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 BMP8AQ7Z5Y6 402 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 TMCO2Q7Z6W1 182 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 Q8N3U1 123 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 SDR42E1Q8WUS8 393 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 EDAQ92838 391 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 PABPC5Q96DU9 382 aaKnown RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 MRPL38Q96DV4 380 aaKnown RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 NACC1Q96RE7 527 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 SLC30A3Q99726 388 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 MDFIQ99750 246 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 MTG1Q9BT17 334 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 PHACTR1Q9C0D0 580 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 KATNBL1Q9H079 304 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CCDC8Q9H0W5 538 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 TSPAN10Q9H1Z9 355 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 DCP1AQ9NPI6 582 aaPredicted RBP6.48□□□□□ -1.37
CHKA-204ENST00000528235 HOMER2Q9NSB8 354 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CLDND1Q9NY35 253 aa6.48□□□□□ -1.37
CHKA-204ENST00000528235 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 TMEM221A6NGB7 291 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 SFI1A8K8P3 1242 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 M0R296 226 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 EFCAB14O75071 495 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 GJB5O95377 273 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 ID4P47928 161 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 DEFB103AP81534 67 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
CHKA-204ENST00000528235 TCF15Q12870 199 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 IKBKEQ14164 716 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 TTF1Q15361 905 aaPredicted RBP6.47□□□□□ -1.37
CHKA-204ENST00000528235 SLC9C2Q5TAH2 1124 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 SH3PXD2AQ5TCZ1 1133 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 CNKSR3Q6P9H4 555 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 FBXO16Q8IX29 292 aaPredicted RBP6.47□□□□□ -1.37
CHKA-204ENST00000528235 FAM9BQ8IZU0 186 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 SIX5Q8N196 739 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 FBXL6Q8N531 539 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 GPATCH11Q8N954 259 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 FGD4Q96M96 766 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 C17orf80Q9BSJ5 609 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 ACAD9Q9H845 621 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 PDGFCQ9NRA1 345 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 ISY1Q9ULR0 285 aaKnown RBP6.47□□□□□ -1.37
CHKA-204ENST00000528235 KIAA1024Q9UPX6 916 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 INSL6Q9Y581 213 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 RAD50Q92878 1312 aa6.47□□□□□ -1.37
CHKA-204ENST00000528235 RIF1Q5UIP0 2472 aaKnown RBP6.47□□□□□ -1.37
CHKA-204ENST00000528235 LOXHD1Q8IVV2 1947 aa6.46□□□□□ -1.37
CHKA-204ENST00000528235 KIAA1671Q9BY89 1806 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms