RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 RASGRP4Q8TDF6 673 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 MRPS27Q92552 414 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 ZNF215Q9UL58 517 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 PADI3Q9ULW8 664 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 USP18Q9UMW8 372 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 MRPL11Q9Y3B7 192 aaKnown RBP12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 PCDHB7Q9Y5E2 793 aa12.86□□□□□ -0.35
CTNNA1-234ENST00000522227 KRBA1A5PL33 1030 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 EOMESO95936 686 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 ZFYP08048 801 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 SDHBP21912 280 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 MRPS6P82932 125 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 PGM5Q15124 567 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 GPR20Q99678 358 aa12.85□□□□□ -0.35
CTNNA1-234ENST00000522227 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 POTEMA6NI47 508 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 CCND2P30279 289 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 NFX1Q12986 1120 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 PAK2Q13177 524 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 PPM1JQ5JR12 505 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 TAF2Q6P1X5 1199 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 RSAD2Q8WXG1 361 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 FTHL17Q9BXU8 183 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 TBC1D17Q9HA65 648 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 KCNK12Q9HB15 430 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 TUBE1Q9UJT0 475 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 DOCK5Q9H7D0 1870 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 NRCAMQ92823 1304 aa12.84□□□□□ -0.35
CTNNA1-234ENST00000522227 PKD1L2Q7Z442 2459 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 MGEA5O60502 916 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 HMMRO75330 724 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 FGFR1P11362 822 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 DMWDQ09019 674 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 TBC1D8BQ0IIM8 1120 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 GRIK4Q16099 956 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 XRRA1Q6P2D8 792 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 VSIG10LQ86VR7 867 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 C1orf210Q8IVY1 113 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 RTKNQ9BST9 563 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 CWH43Q9H720 699 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
CTNNA1-234ENST00000522227 M0QZ92 97 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 OPLAHO14841 1288 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 ORC4O43929 436 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 SNHG28P0DPA3 235 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 TGFB3P10600 412 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 EPCAMP16422 314 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 LAG3P18627 525 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 SARSP49591 514 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 HSD17B4P51659 736 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 TMEM87AQ8NBN3 555 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 GINS2Q9Y248 185 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 LZTS1Q9Y250 596 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 USTQ9Y2C2 406 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 TRPV2Q9Y5S1 764 aa12.82□□□□□ -0.36
CTNNA1-234ENST00000522227 FNDC1Q4ZHG4 1894 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 C2orf71A6NGG8 1288 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 FOXP2O15409 715 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 LRRN2O75325 713 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 PDE4AP27815 886 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 LMNB2Q03252 620 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 KRT17Q04695 432 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 VPS53Q5VIR6 699 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 IER5Q5VY09 327 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 METTL7BQ6UX53 244 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 AUTS2Q8WXX7 1259 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 LRRCC1Q9C099 1032 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 SIT1Q9Y3P8 196 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 PCDHA1Q9Y5I3 950 aa12.81□□□□□ -0.36
CTNNA1-234ENST00000522227 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
CTNNA1-234ENST00000522227 TCF7P36402 384 aaPredicted RBP12.8□□□□□ -0.36
CTNNA1-234ENST00000522227 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms