RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 CDK17Q00537 523 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 TMEM132BQ14DG7 1078 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 ZSWIM4Q9H7M6 989 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 SEL1LQ9UBV2 794 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 ODF2LQ9ULJ1 636 aa28.54■■■□□ 2.16
COL13A1-214ENST00000522165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.54■■■□□ 2.16
COL13A1-214ENST00000522165 ATP2A1O14983 1001 aa28.53■■■□□ 2.16
COL13A1-214ENST00000522165 HNRNPH3P31942 346 aaKnown RBP28.53■■■□□ 2.16
COL13A1-214ENST00000522165 XRRA1Q6P2D8 792 aa28.53■■■□□ 2.16
COL13A1-214ENST00000522165 CCDC155Q8N6L0 562 aa28.53■■■□□ 2.16
COL13A1-214ENST00000522165 ANKRD7Q92527 254 aa28.53■■■□□ 2.16
COL13A1-214ENST00000522165 ADARB2Q9NS39 739 aaKnown RBP28.53■■■□□ 2.16
COL13A1-214ENST00000522165 FAM184BQ9ULE4 1060 aa28.53■■■□□ 2.16
COL13A1-214ENST00000522165 ARHGEF35A5YM69 484 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 KIF5CO60282 957 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 URI1O94763 535 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-214ENST00000522165 GUCY2CP25092 1073 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 KCNMA1Q12791 1236 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 ARHGAP29Q52LW3 1261 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 SMCR8Q8TEV9 937 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-214ENST00000522165 ASTN1O14525 1302 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 ARHGAP25P42331 645 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 NAA30Q147X3 362 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-214ENST00000522165 SH3D19Q5HYK7 790 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 FIZ1Q96SL8 496 aa28.52■■■□□ 2.16
COL13A1-214ENST00000522165 NMT1P30419 496 aaKnown RBP28.51■■■□□ 2.15
COL13A1-214ENST00000522165 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.51■■■□□ 2.15
COL13A1-214ENST00000522165 PLAGL2Q9UPG8 496 aa28.51■■■□□ 2.15
COL13A1-214ENST00000522165 SNCAIPQ9Y6H5 919 aa28.51■■■□□ 2.15
COL13A1-214ENST00000522165 KCNA1Q09470 495 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 FRMD5Q7Z6J6 570 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 CCDC170Q8IYT3 715 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 NEK11Q8NG66 645 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 TEX13BQ9BXU2 312 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 EDEM3Q9BZQ6 932 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 NHEJ1Q9H9Q4 299 aaPredicted RBP28.5■■■□□ 2.15
COL13A1-214ENST00000522165 HOXC10Q9NYD6 342 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 SAMM50Q9Y512 469 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 MYPNQ86TC9 1320 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 CCND2P30279 289 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 VGLL4Q14135 290 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 DLK2Q6UY11 383 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 VSIG10LQ86VR7 867 aa28.5■■■□□ 2.15
COL13A1-214ENST00000522165 SPDYE16A6NNV3 312 aaPredicted RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 ATP9AO75110 1047 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 LYPLA2O95372 231 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 ABL1P00519 1130 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 NR3C1P04150 777 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 CYLC1P35663 651 aaPredicted RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 QARSP47897 775 aaKnown RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 MAP3K9P80192 1104 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 RBM46Q8TBY0 533 aaKnown RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 RNF181Q9P0P0 153 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 DBR1Q9UK59 544 aaKnown RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 WDR90Q96KV7 1748 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 TESPA1A2RU30 521 aaPredicted RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 NR3C2P08235 984 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 RPL13P26373 211 aaKnown RBP28.49■■■□□ 2.15
COL13A1-214ENST00000522165 PADI6Q6TGC4 694 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 ZNF720Q7Z2F6 126 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 BAP1Q92560 729 aa28.49■■■□□ 2.15
COL13A1-214ENST00000522165 ZMYM2Q9UBW7 1377 aa28.48■■■□□ 2.15
COL13A1-214ENST00000522165 UBE4BO95155 1302 aa28.48■■■□□ 2.15
COL13A1-214ENST00000522165 TGFB1I1O43294 461 aa28.48■■■□□ 2.15
COL13A1-214ENST00000522165 HERVK_113P62684 666 aa28.48■■■□□ 2.15
COL13A1-214ENST00000522165 ARMCX3Q9UH62 379 aaPredicted RBP28.48■■■□□ 2.15
COL13A1-214ENST00000522165 MAPK7Q13164 816 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 ZC2HC1CQ53FD0 456 aaPredicted RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 ZNF569Q5MCW4 686 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 FAM178BQ8IXR5 827 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 DCPSQ96C86 337 aaKnown RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 ACAD9Q9H845 621 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 EIF3CLB5ME19 914 aaKnown RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 SLC16A3O15427 465 aaKnown RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 HIP1RO75146 1068 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 KRT83P78385 493 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 ODR4Q5SWX8 454 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 DAW1Q8N136 415 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 NSUN6Q8TEA1 469 aaKnown RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 GPRASP2Q96D09 838 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 EIF3CQ99613 913 aaKnown RBP28.47■■■□□ 2.15
COL13A1-214ENST00000522165 MYO1AQ9UBC5 1043 aa28.47■■■□□ 2.15
COL13A1-214ENST00000522165 AKAP3O75969 853 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 NOL4O94818 638 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 JAK3P52333 1124 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 KRT76Q01546 638 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 KCNH2Q12809 1159 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 NFIL3Q16649 462 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 STXBP4Q6ZWJ1 553 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 RRAGAQ7L523 313 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 MTERF4Q7Z6M4 381 aaKnown RBP28.46■■■□□ 2.15
COL13A1-214ENST00000522165 LRRN4CLQ8ND94 238 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 CYP39A1Q9NYL5 469 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 LRRC53A6NM62 1247 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 ADM5C9JUS6 153 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 CCNE2O96020 404 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 SFNP31947 248 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 PPP2R3AQ06190 1150 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 PDXDC1Q6P996 788 aa28.46■■■□□ 2.15
COL13A1-214ENST00000522165 SULF1Q8IWU6 871 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms