RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 GPATCH2Q9NW75 528 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 RIPOR2Q9Y4F9 1068 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 NPFFR2Q9Y5X5 522 aa6.03□□□□□ -1.44
HMGB1P23-201ENST00000518743 ZNF541Q9H0D2 1346 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 C2orf71A6NGG8 1288 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GNAT3A8MTJ3 354 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 ARVCFO00192 962 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MYO1BO43795 1136 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PRAMEF1O95521 474 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 EOMESO95936 686 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 F2P00734 622 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GYS1P13807 737 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 BMP8BP34820 402 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 GTF2A2P52657 109 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 HUNKP57058 714 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 IL2P60568 153 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMPRSS15P98073 1019 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 KIF23Q02241 960 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PIN1Q13526 163 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MTMR1Q13613 665 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 ARHGAP44Q17R89 818 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CYP27C1Q4G0S4 372 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 SYDE2Q5VT97 1194 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 IQSEC1Q6DN90 963 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 RCSD1Q6JBY9 416 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 MYO1HQ8N1T3 1032 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 BEND7Q8N7W2 519 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 FBLIM1Q8WUP2 373 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 PHF20Q9BVI0 1012 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 DUSP23Q9BVJ7 150 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CELF4Q9BZC1 486 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 LAMA2P24043 3122 aaKnown RBP6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 FER1L6Q2WGJ9 1857 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CENPFP49454 3210 aa6.02□□□□□ -1.45
HMGB1P23-201ENST00000518743 CNTNAP5Q8WYK1 1306 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DLEC1Q9Y238 1755 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CACNA1BQ00975 2339 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BLACEA4D250 179 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 H0Y8X5 98 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 K7ESF4 209 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CBX4O00257 560 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 VAMP4O75379 141 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 FBXO21O94952 628 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GDF11O95390 407 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 MAP4K4O95819 1239 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CD3EP07766 207 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF865P0CJ78 1059 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BMP3P12645 472 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 LSSP48449 732 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 OS9Q13438 667 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SF1Q15637 639 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SEPT7Q16181 437 aaKnown RBP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DPY19L1Q2PZI1 675 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 NXNQ6DKJ4 435 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SEZ6L2Q6UXD5 910 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 C2CD5Q86YS7 1000 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMEM151AQ8N4L1 468 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 KREMEN2Q8NCW0 462 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 DIO2Q92813 273 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZNF622Q969S3 477 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GPR62Q9BZJ7 368 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 CDH19Q9H159 772 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 AASDHPPTQ9NRN7 309 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 GABBR1Q9UBS5 961 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 TRAF6Q9Y4K3 522 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 PCDHA9Q9Y5H5 950 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 BAHCC1Q9P281 2608 aa6.01□□□□□ -1.45
HMGB1P23-201ENST00000518743 SSU72P8A0A1W2PR75 194 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 H0YIN7 160 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 WNT9AO14904 365 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 RFPL1O75677 317 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 THBDP07204 575 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 PAMP19021 973 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SESN3P58005 492 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 ST5P78524 1137 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SNW1Q13573 536 aaKnown RBP6□□□□□ -1.45
HMGB1P23-201ENST00000518743 NFKBIBQ15653 356 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 SGO2Q562F6 1265 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 LBX2Q6XYB7 198 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 TMC3Q7Z5M5 1100 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CERS3Q8IU89 383 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM20CQ8IXL6 584 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MFSD4AQ8N468 514 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CNTD1Q8N815 330 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 NPLOC4Q8TAT6 608 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MMP19Q99542 508 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 P2RX7Q99572 595 aaKnown RBP6□□□□□ -1.45
HMGB1P23-201ENST00000518743 MTMR10Q9NXD2 777 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 ZIM2Q9NZV7 527 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 CACNA1SQ13698 1873 aa6□□□□□ -1.45
HMGB1P23-201ENST00000518743 RPTORQ8N122 1335 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 MUC3AQ02505 3323 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 A0A1W2PPC1 479 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 SHTN1A0MZ66 631 aa5.99□□□□□ -1.45
HMGB1P23-201ENST00000518743 FAM47E-STBD1D6RA91 191 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms