RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FGD4Q96M96 766 aa13.21□□□□□ -0.29
PCDHGA6-201ENST00000517434 PIGSQ96S52 555 aa13.21□□□□□ -0.29
PCDHGA6-201ENST00000517434 GOLGA8CPA6NN73 597 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 RWDD2BP57060 319 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 KRT76Q01546 638 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 SNAPC2Q13487 334 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 KRT80Q6KB66 452 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 TRIM50Q86XT4 487 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 FAM167BQ9BTA0 163 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 ACAD9Q9H845 621 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
PCDHGA6-201ENST00000517434 TRPA1O75762 1119 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 COPB1P53618 953 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TGFB2P61812 414 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 GPSM2P81274 684 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TAF1CQ15572 869 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 PSMD7P51665 324 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 NDUFA8P51970 172 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 EHHADHQ08426 723 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 SPP2Q13103 211 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 PTGDRQ13258 359 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 VSTM4Q8IW00 320 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TRIM42Q8IWZ5 723 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 LPAR1Q92633 364 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 BTBD18B2RXH4 712 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 LMNB1P20700 586 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 U2AF1L4Q8WU68 220 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 TRIM11Q96F44 468 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 SLC8A2Q9UPR5 921 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 KIAA1024Q9UPX6 916 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 DAAM1Q9Y4D1 1078 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 ABL1P00519 1130 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 PDE6CP51160 858 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 ARMCX2Q7L311 632 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 STAMBPL1Q96FJ0 436 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 NT5C1BQ96P26 610 aa13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 MRPL46Q9H2W6 279 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
PCDHGA6-201ENST00000517434 DTNBO60941 627 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 MYL3P08590 195 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 EEF1DP29692 281 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 CDC42EP1Q00587 391 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 PTK2Q05397 1052 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ANKRD7Q92527 254 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 EFHD1Q9BUP0 239 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ANKFY1Q9P2R3 1169 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 CPDO75976 1380 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZC3H13Q5T200 1668 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 MAPK13O15264 365 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 PDHA1P08559 390 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SESTD1Q86VW0 696 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 MAP7D3Q8IWC1 876 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 AGBL3Q8NEM8 1001 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 STAMQ92783 540 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 RNF146Q9NTX7 359 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 DONSONQ9NYP3 566 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ARHGAP10A1A4S6 786 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ENO4A6NNW6 628 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 LDHAP00338 332 aaKnown RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SFNP31947 248 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 RCN2Q14257 317 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ALX1Q15699 326 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 CCDC89Q8N998 374 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 MMP19Q99542 508 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 A0A0G2JLW4 131 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 ZBTB5O15062 677 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 STAM2O75886 525 aa13.19□□□□□ -0.3
PCDHGA6-201ENST00000517434 SLC16A2P36021 539 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms