RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 WDR24Q96S15 920 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 NHEJ1Q9H9Q4 299 aaPredicted RBP16.83■□□□□ 0.28
SDHA-218ENST00000515752 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
SDHA-218ENST00000515752 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 STAM2O75886 525 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 MAPTP10636 758 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 CCND2P30279 289 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 QARSP47897 775 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 KLK7P49862 253 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 CASP5P51878 434 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 TUBB4BP68371 445 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 HSP90AA2PQ14568 343 aaPredicted RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 NSMFQ6X4W1 530 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 NLRX1Q86UT6 975 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 ACRBPQ8NEB7 543 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 REPS2Q8NFH8 660 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 GPRASP2Q96D09 838 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 CCDC42Q96M95 316 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 TEX13BQ9BXU2 312 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 FAM207AQ9NSI2 230 aaPredicted RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 CEP72Q9P209 647 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 CTAGE9A4FU28 777 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 KRT86O43790 486 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 MYBP10242 640 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 EIF2AK2P19525 551 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 SPA17Q15506 151 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 FAM178BQ8IXR5 827 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 ZNF710Q8N1W2 664 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.288e-20■■■□□ 17.8
SDHA-218ENST00000515752 IL31RAQ8NI17 732 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 TSC1Q92574 1164 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
SDHA-218ENST00000515752 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 TSGA10Q9BZW7 698 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
SDHA-218ENST00000515752 AFG3L2Q9Y4W6 797 aa16.82■□□□□ 0.28
SDHA-218ENST00000515752 EFCAB8A8MWE9 144 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 WDR64B1ANS9 1081 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 RSPH10B2B2RC85 870 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 PRPF6O94906 941 aaKnown RBP16.81■□□□□ 0.28
SDHA-218ENST00000515752 NR3C1P04150 777 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 RSPH10BP0C881 870 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 HIRAP54198 1017 aaPredicted RBP16.81■□□□□ 0.28
SDHA-218ENST00000515752 DGKZQ13574 1117 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 ZNF569Q5MCW4 686 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 SNRNP48Q6IEG0 339 aaKnown RBP16.81■□□□□ 0.28
SDHA-218ENST00000515752 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 HS2ST1Q7LGA3 356 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 VSIG10LQ86VR7 867 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 SLC17A8Q8NDX2 589 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 MKNK1Q9BUB5 465 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 LARSQ9P2J5 1176 aaKnown RBP16.81■□□□□ 0.28
SDHA-218ENST00000515752 SAMM50Q9Y512 469 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 MRFAP1Q9Y605 127 aa16.81■□□□□ 0.28
SDHA-218ENST00000515752 DKC1O60832 514 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDHA-218ENST00000515752 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 HOXD13P35453 343 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ARHGAP25P42331 645 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ITGB3BPQ13352 177 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 BAATQ14032 418 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ODR4Q5SWX8 454 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 PRAMEF18Q5VWM3 479 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 KIAA1328Q86T90 577 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 C4orf19Q8IY42 314 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 BANK1Q8NDB2 785 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ACAD9Q9H845 621 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 SSU72P8A0A1W2PR75 194 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 NKRFO15226 690 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDHA-218ENST00000515752 MYCLP12524 364 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 PSMC5P62195 406 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 KCNMA1Q12791 1236 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 KCNH2Q12809 1159 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 ZNF746Q6NUN9 644 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 PADI6Q6TGC4 694 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 RRAGAQ7L523 313 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 PDCL2Q8N4E4 241 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 UBXN4Q92575 508 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 CCDC43Q96MW1 224 aaKnown RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 SENP7Q9BQF6 1050 aa16.8■□□□□ 0.28
SDHA-218ENST00000515752 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
SDHA-218ENST00000515752 ASTN1O14525 1302 aa16.79■□□□□ 0.28
SDHA-218ENST00000515752 DDX39AO00148 427 aaKnown RBP16.79■□□□□ 0.28
SDHA-218ENST00000515752 FANCGO15287 622 aa16.79■□□□□ 0.28
SDHA-218ENST00000515752 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
SDHA-218ENST00000515752 AFPP02771 609 aaKnown RBP16.79■□□□□ 0.28
SDHA-218ENST00000515752 NR3C2P08235 984 aa16.79■□□□□ 0.28
SDHA-218ENST00000515752 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
SDHA-218ENST00000515752 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
SDHA-218ENST00000515752 BAP1Q92560 729 aa16.79■□□□□ 0.28
SDHA-218ENST00000515752 NAPGQ99747 312 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms