RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CNOT4O95628 575 aaKnown RBP4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 KRT18P05783 430 aaKnown RBP4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 GRIA2P42262 883 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 HLTFQ14527 1009 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 SMAD2Q15796 467 aaKnown RBP4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 ODR4Q5SWX8 454 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 NBPF6Q5VWK0 638 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 CASC1Q6TDU7 716 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 GPR155Q7Z3F1 870 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 PCGF5Q86SE9 256 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 TRIM48Q8IWZ4 208 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 DTX3Q8N9I9 347 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 C8orf48Q96LL4 319 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 NBPF4Q96M43 638 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 GNRHR2Q96P88 292 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 MENTQ9BUN1 341 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 CDIP1Q9H305 208 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLC6A20Q9NP91 592 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 HSPBP1Q9NZL4 362 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 NPFFR2Q9Y5X5 522 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 ENPP3O14638 875 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 FBXO21O94952 628 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 CKMP06732 381 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 HSP90AB1P08238 724 aaKnown RBP4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 GLRBP48167 497 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 PPP2R2AP63151 447 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 POU5F1Q01860 360 aaKnown RBP4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 LMOD3Q0VAK6 560 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 FXNQ16595 210 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLC10A6Q3KNW5 377 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 CYP4F22Q6NT55 531 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 PPP4R4Q6NUP7 873 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 CCDC174Q6PII3 467 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 RINLQ6ZS11 566 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 Q6ZUG5 572 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 USP53Q70EK8 1073 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 TTLL11Q8NHH1 800 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 CLEC4DQ8WXI8 215 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 KCTD13Q8WZ19 329 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 LRRC37BQ96QE4 947 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 ZNF341Q9BYN7 854 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 ZHX3Q9H4I2 956 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 PRKAG3Q9UGI9 489 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 ZFP69BQ9UJL9 534 aa4.49□□□□□ -1.69
HMGB3P15-201ENST00000507326 KNG1P01042 644 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 LTFP02788 710 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 CAPNS1P04632 268 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 PDGFRBP09619 1106 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 COL6A2P12110 1019 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 CD53P19397 219 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 CSF2RBP32927 897 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 ETFBP38117 255 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 MAP4K2Q12851 820 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 KLF10Q13118 480 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 TUSC3Q13454 348 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 VPS72Q15906 364 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 SKIDA1Q1XH10 827 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 PAN2Q504Q3 1202 aaKnown RBP4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 C11orf96Q7Z7L8 435 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 GIMAP8Q8ND71 665 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 MKL1Q969V6 931 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 LMF1Q96S06 567 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 PHF20Q9BVI0 1012 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 SEMA4AQ9H3S1 761 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLITRK6Q9H5Y7 841 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 PIF1Q9H611 641 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 SEC61A2Q9H9S3 476 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 GPR27Q9NS67 375 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 ING1Q9UK53 422 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 TESMINQ9Y4I5 508 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 SCINQ9Y6U3 715 aa4.48□□□□□ -1.69
HMGB3P15-201ENST00000507326 CCDC189A1A4V9 331 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 AGRPO00253 132 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 FOXS1O43638 330 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 ZNF500O60304 480 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 DLX3O60479 287 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 GJB6O95452 261 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 FAHP16930 419 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 UBE4AQ14139 1066 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 HS1BP3Q53T59 392 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 CRB2Q5IJ48 1285 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 TTLL5Q6EMB2 1281 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 TCTN3Q6NUS6 607 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 EEPD1Q7L9B9 569 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 OTOP3Q7RTS5 596 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 SAMD3Q8N6K7 520 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 STPG3Q8N7X2 389 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 AJUBAQ96IF1 538 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 PAGR1Q9BTK6 254 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 IER2Q9BTL4 223 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 ARHGAP20Q9P2F6 1191 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 MRPL42Q9Y6G3 142 aaKnown RBP4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLC4A7Q9Y6M7 1214 aa4.47□□□□□ -1.69
HMGB3P15-201ENST00000507326 A0A1W2PQU0 124 aa4.46□□□□□ -1.7
HMGB3P15-201ENST00000507326 FOSP01100 380 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P15-201ENST00000507326 CHGBP05060 677 aa4.46□□□□□ -1.7
HMGB3P15-201ENST00000507326 MYL1P05976 194 aa4.46□□□□□ -1.7
HMGB3P15-201ENST00000507326 CD276Q5ZPR3 534 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms