RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 LRRC4CQ9HCJ2 640 aa20.37■□□□□ 0.85
SCARB2-203ENST00000502908 KCNMB3Q9NPA1 279 aa20.37■□□□□ 0.85
SCARB2-203ENST00000502908 USP40Q9NVE5 1235 aa20.37■□□□□ 0.85
SCARB2-203ENST00000502908 TMEM59LQ9UK28 342 aa20.37■□□□□ 0.85
SCARB2-203ENST00000502908 PCDHB13Q9Y5F0 798 aa20.37■□□□□ 0.85
SCARB2-203ENST00000502908 PLIN4Q96Q06 1357 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 MYO1FO00160 1098 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 AFPP02771 609 aaKnown RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 USP11P51784 963 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 NFIAQ12857 509 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 USH1GQ495M9 461 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 C15orf52Q6ZUT6 534 aaKnown RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 ADAT2Q7Z6V5 191 aaKnown RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 SLF2Q8IX21 1173 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 MREGQ8N565 214 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 LRRC57Q8N9N7 239 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 BTAF1O14981 1849 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 E7EVH7 732 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 PPP1R37O75864 691 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 XRCC5P13010 732 aaKnown RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 POLD1P28340 1107 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 ITGB3BPQ13352 177 aaPredicted RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 PPP1R18Q6NYC8 613 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 ZNF473Q8WTR7 871 aaKnown RBP20.36■□□□□ 0.85
SCARB2-203ENST00000502908 TRIM31Q9BZY9 425 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 EPN3Q9H201 632 aa20.36■□□□□ 0.85
SCARB2-203ENST00000502908 RGL2O15211 777 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 GCFC2P16383 781 aaKnown RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 PTGISQ16647 500 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 FOXR2Q6PJQ5 311 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 UBLCP1Q8WVY7 318 aaPredicted RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 ISCUQ9H1K1 167 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 KRIT1O00522 736 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 DAPK3O43293 454 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 GFPT2O94808 682 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 TMOD1P28289 359 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 CTNNA1P35221 906 aaKnown RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 COPB2P35606 906 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 HSPA9P38646 679 aaKnown RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 TCP10Q12799 353 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 KNOP1Q1ED39 458 aaKnown RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 ARHGAP27Q6ZUM4 889 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 PEX26Q7Z412 305 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 KSR1Q8IVT5 923 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 TPCN2Q8NHX9 752 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 CYP2W1Q8TAV3 490 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 U2AF1L4Q8WU68 220 aaKnown RBP20.35■□□□□ 0.85
SCARB2-203ENST00000502908 OSGEPQ9NPF4 335 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 GCNT4Q9P109 453 aa20.35■□□□□ 0.85
SCARB2-203ENST00000502908 ADAMTSL1Q8N6G6 1762 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 MDH1P40925 334 aaKnown RBP20.34■□□□□ 0.85
SCARB2-203ENST00000502908 EDRF1Q3B7T1 1238 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 RNF187Q5TA31 235 aaPredicted RBP20.34■□□□□ 0.85
SCARB2-203ENST00000502908 KCNV1Q6PIU1 500 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 DAAM2Q86T65 1068 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 CCT8L2Q96SF2 557 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 DPH5Q9H2P9 285 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 FRMD3A2A2Y4 597 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 TTI1O43156 1089 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 GCNT3O95395 438 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 SPATA31C1P0DKV0 1188 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 SPIRE1Q08AE8 756 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 NLRP14Q86W24 1093 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 OTUD6BQ8N6M0 293 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 BHMT2Q9H2M3 363 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 FBXL5Q9UKA1 691 aa20.34■□□□□ 0.85
SCARB2-203ENST00000502908 ZNF831Q5JPB2 1677 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 DCDC2CA8MYV0 355 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 PGRMC1O00264 195 aaKnown RBP20.33■□□□□ 0.85
SCARB2-203ENST00000502908 KIAA0754O94854 1291 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 ZC3H3Q8IXZ2 948 aaKnown RBP20.33■□□□□ 0.85
SCARB2-203ENST00000502908 MYCBPAPQ8TBZ2 947 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 RUSC1Q9BVN2 902 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 TMBIM4Q9HC24 238 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 SIX2Q9NPC8 291 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 BCS1LQ9Y276 419 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 NR2E1Q9Y466 385 aa20.33■□□□□ 0.85
SCARB2-203ENST00000502908 ASTN1O14525 1302 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.84
SCARB2-203ENST00000502908 GOLGA6L10A6NI86 522 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 FAM86B1E9PN63 330 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 DDX3XO00571 662 aaKnown RBP eCLIP20.33■□□□□ 0.843e-14■■■■■ 29.4
SCARB2-203ENST00000502908 MEIS2O14770 477 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 NR3C1P04150 777 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 FAM86B2P0C5J1 330 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 ABCB4P21439 1286 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 ARHGAP4P98171 946 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 EPHA7Q15375 998 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 GPATCH4Q5T3I0 446 aaKnown RBP20.33■□□□□ 0.84
SCARB2-203ENST00000502908 MMS22LQ6ZRQ5 1243 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 CD302Q8IX05 232 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 RGL1Q9NZL6 768 aa20.33■□□□□ 0.84
SCARB2-203ENST00000502908 GCOM1H8Y6P7 765 aaPredicted RBP20.32■□□□□ 0.84
SCARB2-203ENST00000502908 MYZAPP0CAP1 466 aa20.32■□□□□ 0.84
SCARB2-203ENST00000502908 HOXA13P31271 388 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms