RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 NLRX1Q86UT6 975 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 TMEM105Q8N8V8 129 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 GIMAP8Q8ND71 665 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-236ENST00000498808 SEPT1Q8WYJ6 367 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
HDAC6-236ENST00000498808 FSD2A1L4K1 749 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 FSCN2O14926 492 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 FGF18O76093 207 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 INSRRP14616 1297 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 PAK2Q13177 524 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 ANKRD54Q6NXT1 300 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 XRRA1Q6P2D8 792 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 KREMEN2Q8NCW0 462 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 GLG1Q92896 1179 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 APOL5Q9BWW9 433 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 SENP2Q9HC62 589 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 CDH22Q9UJ99 828 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 TRPC6Q9Y210 931 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 PCDHB12Q9Y5F1 795 aa17.98■□□□□ 0.47
HDAC6-236ENST00000498808 GVINP1Q7Z2Y8 2422 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 RRN3P2A6NIE6 340 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 RPLP2P05387 115 aaKnown RBP17.97■□□□□ 0.47
HDAC6-236ENST00000498808 IBSPP21815 317 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-236ENST00000498808 TECP42680 631 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
HDAC6-236ENST00000498808 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
HDAC6-236ENST00000498808 SMARCC2Q8TAQ2 1214 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 PIBF1Q8WXW3 757 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 GPRASP2Q96D09 838 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 PCYT2Q99447 389 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 SMARCAD1Q9H4L7 1026 aa17.97■□□□□ 0.47
HDAC6-236ENST00000498808 MEIS2O14770 477 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 MGEA5O60502 916 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 BRD1O95696 1058 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 ITGB5P18084 799 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 APOBRQ0VD83 1088 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 TROAPQ12815 778 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 ERMP1Q7Z2K6 904 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 COLGALT1Q8NBJ5 622 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 RASGRP4Q8TDF6 673 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 TRAPPC12Q8WVT3 735 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 CELF4Q9BZC1 486 aaKnown RBP17.96■□□□□ 0.47
HDAC6-236ENST00000498808 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 SMOC2Q9H3U7 446 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 TMEM260Q9NX78 707 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 PKD2L1Q9P0L9 805 aa17.96■□□□□ 0.47
HDAC6-236ENST00000498808 KDM3AQ9Y4C1 1321 aa17.96■□□□□ 0.46
HDAC6-236ENST00000498808 VPS13AQ96RL7 3174 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 CACNA1AO00555 2505 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 TBKBP1A7MCY6 615 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 M0QZ92 97 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 PIK3CDO00329 1044 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 FAM102BQ5T8I3 360 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 PLPP4Q5VZY2 271 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 PDE12Q6L8Q7 609 aaKnown RBP17.95■□□□□ 0.46
HDAC6-236ENST00000498808 THNSL1Q8IYQ7 743 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 DIAPH3Q9NSV4 1193 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 SORCS3Q9UPU3 1222 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 PCDHB7Q9Y5E2 793 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 PCDHA2Q9Y5H9 948 aa17.95■□□□□ 0.46
HDAC6-236ENST00000498808 SRGAP2BP0DMP2 458 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 NFX1Q12986 1120 aaKnown RBP17.94■□□□□ 0.46
HDAC6-236ENST00000498808 MTMR3Q13615 1198 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 LLGL2Q6P1M3 1020 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 FRMD5Q7Z6J6 570 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 UBALD2Q8IYN6 164 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 CUL5Q93034 780 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 IL25Q9H293 177 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 ERVK-5Q9HDB9 667 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 TSHZ2Q9NRE2 1034 aa17.94■□□□□ 0.46
HDAC6-236ENST00000498808 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
HDAC6-236ENST00000498808 HIDE1A8MVS5 230 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 C2CD4DB7Z1M9 353 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 ID4P47928 161 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 KRT76Q01546 638 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-236ENST00000498808 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 POMKQ9H5K3 350 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 CWH43Q9H720 699 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 LZTS1Q9Y250 596 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 NR2E1Q9Y466 385 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
HDAC6-236ENST00000498808 SMIM35A0A1B0GVV1 85 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 C9IYK1 514 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
HDAC6-236ENST00000498808 HOXB8P17481 243 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-236ENST00000498808 PLCB3Q01970 1234 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 MTMR1Q13613 665 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 TMEM40Q8WWA1 233 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 MRPS27Q92552 414 aaKnown RBP17.92■□□□□ 0.46
HDAC6-236ENST00000498808 NKD2Q969F2 451 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-236ENST00000498808 ADAM2Q99965 735 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 TCF25Q9BQ70 676 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 CDHR5Q9HBB8 845 aa17.92■□□□□ 0.46
HDAC6-236ENST00000498808 RGS18Q9NS28 235 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms