RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 RXRAP19793 462 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 COASYQ13057 564 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 PAK2Q13177 524 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-212ENST00000498540 IER5LQ5T953 404 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
TRAF4-212ENST00000498540 LZTS2Q9BRK4 669 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 TMX1Q9H3N1 280 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 JPH1Q9HDC5 661 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-212ENST00000498540 JADE2Q9NQC1 790 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 TMEM221A6NGB7 291 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 LOC730098B7Z3J9 87 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 M0QZ92 97 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 M0R296 226 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 SGSM2O43147 1006 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 RPLP2P05387 115 aaKnown RBP16.84■□□□□ 0.29
TRAF4-212ENST00000498540 STAG3L1P0CL83 205 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 IBSPP21815 317 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-212ENST00000498540 PLCB4Q15147 1175 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 TMEM266Q2M3C6 531 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 TRIM67Q6ZTA4 783 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 BMP8AQ7Z5Y6 402 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 CELF4Q9BZC1 486 aaKnown RBP16.84■□□□□ 0.29
TRAF4-212ENST00000498540 SLC9A2Q9UBY0 812 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 PCDHA6Q9UN73 950 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 USP15Q9Y4E8 981 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-212ENST00000498540 PCDHA8Q9Y5H6 950 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 PCDHA2Q9Y5H9 948 aa16.84■□□□□ 0.29
TRAF4-212ENST00000498540 SPDYE3A6NKU9 549 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 PRC1O43663 620 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 PPFIA3O75145 1194 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 GNAQP50148 359 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
TRAF4-212ENST00000498540 CBX2Q14781 532 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-212ENST00000498540 CYP2W1Q8TAV3 490 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 PBXIP1Q96AQ6 731 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 AZI2Q9H6S1 392 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
TRAF4-212ENST00000498540 RBM8AQ9Y5S9 174 aaKnown RBP16.83■□□□□ 0.28
TRAF4-212ENST00000498540 KDM3AQ9Y4C1 1321 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 SH2B2O14492 632 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-212ENST00000498540 MAFGO15525 162 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 MGEA5O60502 916 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 ACTR2P61160 394 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 ZXDAP98168 799 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 CASC1Q6TDU7 716 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 VN1R2Q8NFZ6 395 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 LRFN2Q9ULH4 789 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 ZDBF2Q9HCK1 2354 aa16.82■□□□□ 0.28
TRAF4-212ENST00000498540 SMIM35A0A1B0GVV1 85 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 PER2O15055 1255 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 SARSP49591 514 aaKnown RBP16.81■□□□□ 0.28
TRAF4-212ENST00000498540 KRT76Q01546 638 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 MTHFD1LQ6UB35 978 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 PLPPR4Q7Z2D5 763 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 HEATR3Q7Z4Q2 680 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 CCDC82Q8N4S0 544 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 MXRA8Q9BRK3 442 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 TLE6Q9H808 572 aa16.81■□□□□ 0.28
TRAF4-212ENST00000498540 EVPLQ92817 2033 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 NFASCO94856 1347 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 ARP10275 920 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 STAT5BP51692 787 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 PTPN5P54829 565 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 TCF15Q12870 199 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 NFX1Q12986 1120 aaKnown RBP16.8■□□□□ 0.28
TRAF4-212ENST00000498540 ITGB3BPQ13352 177 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-212ENST00000498540 TMTC3Q6ZXV5 915 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 TMEM40Q8WWA1 233 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 PGBD1Q96JS3 809 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 RPGRIP1Q96KN7 1286 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 PHF7Q9BWX1 381 aaPredicted RBP16.8■□□□□ 0.28
TRAF4-212ENST00000498540 CDHR5Q9HBB8 845 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 ERVK-5Q9HDB9 667 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 TLR9Q9NR96 1032 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
TRAF4-212ENST00000498540 USP34Q70CQ2 3546 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 MCM5P33992 734 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 SPOUT1Q5T280 376 aaKnown RBP16.79■□□□□ 0.28
TRAF4-212ENST00000498540 FAM102BQ5T8I3 360 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 SUGP1Q8IWZ8 645 aaKnown RBP16.79■□□□□ 0.28
TRAF4-212ENST00000498540 NME8Q8N427 588 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 FBXL6Q8N531 539 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 SUSD6Q92537 303 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 TNPO1Q92973 898 aaKnown RBP16.79■□□□□ 0.28
TRAF4-212ENST00000498540 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
TRAF4-212ENST00000498540 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
TRAF4-212ENST00000498540 NOC2LQ9Y3T9 749 aaKnown RBP16.79■□□□□ 0.28
TRAF4-212ENST00000498540 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms