RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 TLE6Q9H808 572 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 AAASQ9NRG9 546 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
VARS-228ENST00000495010 SLC9A2Q9UBY0 812 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
VARS-228ENST00000495010 CALM1P0DP23 149 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 CALM2P0DP24 149 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 CALM3P0DP25 149 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
VARS-228ENST00000495010 CHMLP26374 656 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 NFX1Q12986 1120 aaKnown RBP16.31■□□□□ 0.2
VARS-228ENST00000495010 UBE2SQ16763 222 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
VARS-228ENST00000495010 NME8Q8N427 588 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 SMRP1Q8NCR6 262 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
VARS-228ENST00000495010 PCDHA2Q9Y5H9 948 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 TAF6LQ9Y6J9 622 aa16.31■□□□□ 0.2
VARS-228ENST00000495010 IGSF9BQ9UPX0 1349 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 PLEKHA8P1O95397 391 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 STAT5BP51692 787 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 ZXDAP98168 799 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 KRT76Q01546 638 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 ODR4Q5SWX8 454 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 CMTR1Q8N1G2 835 aaKnown RBP16.3■□□□□ 0.2
VARS-228ENST00000495010 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
VARS-228ENST00000495010 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 MTA3Q9BTC8 594 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 GINS2Q9Y248 185 aa16.3■□□□□ 0.2
VARS-228ENST00000495010 USP15Q9Y4E8 981 aaPredicted RBP16.3■□□□□ 0.2
VARS-228ENST00000495010 FSD2A1L4K1 749 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 LOC730098B7Z3J9 87 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 PRC1O43663 620 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 SRGAP2BP0DMP2 458 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 MCM5P33992 734 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 SARSP49591 514 aaKnown RBP16.29■□□□□ 0.2
VARS-228ENST00000495010 UBE3AQ05086 875 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 FAM43BQ6ZT52 329 aaPredicted RBP16.29■□□□□ 0.2
VARS-228ENST00000495010 PLPPR4Q7Z2D5 763 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 TRAPPC12Q8WVT3 735 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 PCYT2Q99447 389 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 PHF7Q9BWX1 381 aaPredicted RBP16.29■□□□□ 0.2
VARS-228ENST00000495010 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
VARS-228ENST00000495010 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 hCG_1642624A0A1W2PR95 340 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 RXRAP19793 462 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 GATMP50440 423 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 ACTR2P61160 394 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 MTHFD1LQ6UB35 978 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 THNSL1Q8IYQ7 743 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 PRSS33Q8NF86 280 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 MAP4K1Q92918 833 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 TMEM87BQ96K49 555 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 NEK1Q96PY6 1258 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 CDCA3Q99618 268 aaPredicted RBP16.28■□□□□ 0.2
VARS-228ENST00000495010 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 KIAA1671Q9BY89 1806 aa16.28■□□□□ 0.2
VARS-228ENST00000495010 NFASCO94856 1347 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 KDM3AQ9Y4C1 1321 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 PER2O15055 1255 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 SGSM2O43147 1006 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 RPS6KA5O75582 802 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 GLP2RO95838 553 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 SLC26A2P50443 739 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 CBX2Q14781 532 aaPredicted RBP16.27■□□□□ 0.2
VARS-228ENST00000495010 IER5LQ5T953 404 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
VARS-228ENST00000495010 FBXL6Q8N531 539 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 TMX1Q9H3N1 280 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 TMEM260Q9NX78 707 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 PCDHGC5Q9Y5F6 944 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
VARS-228ENST00000495010 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
VARS-228ENST00000495010 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
VARS-228ENST00000495010 BACH1O14867 736 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 GPR182O15218 404 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 FGF18O76093 207 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
VARS-228ENST00000495010 KLRC1P26715 233 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 PDE4AP27815 886 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 FAM160B1Q5W0V3 765 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 ZBTB33Q86T24 672 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms