RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 IQSEC1Q6DN90 963 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 HDGFL2Q7Z4V5 671 aaPredicted RBP5.42□□□□□ -1.54
CD46-216ENST00000490278 PROSER1Q86XN7 944 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 NME9Q86XW9 330 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 HIPK4Q8NE63 616 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 FAM84AQ96KN4 292 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 C16orf92Q96LL3 132 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 TYW1Q9NV66 732 aaKnown RBP5.42□□□□□ -1.54
CD46-216ENST00000490278 BTBD7Q9P203 1132 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 RBPJLQ9UBG7 517 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 ZNF839A8K0R7 811 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 GOLGA6L22H0YM25 854 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 TMEM253P0C7T8 217 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 PTGS1P23219 599 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 GLDCP23378 1020 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 CD40P25942 277 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 JAG1P78504 1218 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 PFKPQ01813 784 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 ADCY1Q08828 1119 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 FAPQ12884 760 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 FAM50AQ14320 339 aaKnown RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 LRRC32Q14392 662 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 ESRP1Q6NXG1 681 aaKnown RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 TMC5Q6UXY8 1006 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 LIPIQ6XZB0 460 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 SYDE1Q6ZW31 735 aaPredicted RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 IGDCC4Q8TDY8 1250 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 ERCC4Q92889 916 aaPredicted RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 SIGLEC10Q96LC7 697 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 TMEM209Q96SK2 561 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 PUS7LQ9H0K6 701 aaKnown RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 ZMAT4Q9H898 229 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 SLC39A2Q9NP94 309 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 DLL4Q9NR61 685 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 DDX56Q9NY93 547 aaKnown RBP5.41□□□□□ -1.54
CD46-216ENST00000490278 WASF3Q9UPY6 502 aa5.41□□□□□ -1.54
CD46-216ENST00000490278 PRAMEF22A3QJZ6 481 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 RAB11FIP3O75154 756 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 MED14OSP0DP75 135 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 MC4RP32245 332 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 LIMS1P48059 325 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 PRAMEF18Q5VWM3 479 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 RTN4RL1Q86UN2 441 aaPredicted RBP5.4□□□□□ -1.54
CD46-216ENST00000490278 FERMT3Q86UX7 667 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 RASSF3Q86WH2 238 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 COG1Q8WTW3 980 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 RTF1Q92541 710 aaKnown RBP5.4□□□□□ -1.54
CD46-216ENST00000490278 E2F7Q96AV8 911 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
CD46-216ENST00000490278 PPP1R16BQ96T49 567 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 SYT3Q9BQG1 590 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 GORASP1Q9BQQ3 440 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 INCENPQ9NQS7 918 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 UCKL1Q9NWZ5 548 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 IRAK3Q9Y616 596 aa5.4□□□□□ -1.54
CD46-216ENST00000490278 UBA6A0AVT1 1052 aaPredicted RBP5.39□□□□□ -1.55
CD46-216ENST00000490278 PRKD3O94806 890 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 ITGA1P56199 1179 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 SKIDA1Q1XH10 827 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 FRMD7Q6ZUT3 714 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 STK32CQ86UX6 486 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 CILP2Q8IUL8 1156 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 PHYKPLQ8IUZ5 450 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 TMEFF1Q8IYR6 380 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 KYQ8NBH2 561 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 STAG1Q8WVM7 1258 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 CLIC6Q96NY7 704 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 NOX5Q96PH1 765 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 SLC38A3Q99624 504 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 C11orf84Q9BUA3 381 aaPredicted RBP5.39□□□□□ -1.55
CD46-216ENST00000490278 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 MS4A5Q9H3V2 200 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 GALNT8Q9NY28 637 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 USP36Q9P275 1121 aaKnown RBP5.39□□□□□ -1.55
CD46-216ENST00000490278 ARHGAP20Q9P2F6 1191 aa5.39□□□□□ -1.55
CD46-216ENST00000490278 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
CD46-216ENST00000490278 TCAF2A6NFQ2 919 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 NFIBO00712 420 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 KDM1AO60341 852 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 KATNA1O75449 491 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 MPIG6BO95866 241 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 PDGFRBP09619 1106 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 HSP90B1P14625 803 aaKnown RBP5.38□□□□□ -1.55
CD46-216ENST00000490278 THBS2P35442 1172 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 EXOSC10Q01780 885 aaKnown RBP5.38□□□□□ -1.55
CD46-216ENST00000490278 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
CD46-216ENST00000490278 ADAM9Q13443 819 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 MTMR1Q13613 665 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 BRDTQ58F21 947 aaPredicted RBP5.38□□□□□ -1.55
CD46-216ENST00000490278 TTC38Q5R3I4 469 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 OGFOD2Q6N063 350 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 ATG14Q6ZNE5 492 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 CNTD1Q8N815 330 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 TTLL6Q8N841 843 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 C7orf31Q8N865 590 aa5.38□□□□□ -1.55
CD46-216ENST00000490278 CALML6Q8TD86 181 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms