RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 TACO1Q9BSH4 297 aaKnown RBP4.55□□□□□ -1.68
RBM28-207ENST00000488249 TARS2Q9BW92 718 aaKnown RBP4.55□□□□□ -1.68
RBM28-207ENST00000488249 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
RBM28-207ENST00000488249 C9orf118A6NHY6 69 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 RASSF10A6NK89 507 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 H7C1D1 291 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 DVL2O14641 736 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 KNG1P01042 644 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 MC4RP32245 332 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 KIF11P52732 1056 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 GJA9P57773 515 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 PCBP1Q15365 356 aaKnown RBP eCLIP4.54□□□□□ -1.68
RBM28-207ENST00000488249 CATSPEREQ5SY80 951 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 TTLL10Q6ZVT0 673 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 ZDHHC14Q8IZN3 488 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 AHI1Q8N157 1196 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 PPM1KQ8N3J5 372 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 ASB15Q8WXK1 588 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 YTHDC1Q96MU7 727 aaKnown RBP4.54□□□□□ -1.68
RBM28-207ENST00000488249 TMEM168Q9H0V1 697 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 INCENPQ9NQS7 918 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 UCKL1Q9NWZ5 548 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 GALNT8Q9NY28 637 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 FTSJ1Q9UET6 329 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 ZKSCAN5Q9Y2L8 839 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
RBM28-207ENST00000488249 A0A087X0B3 334 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 PRAMEF22A3QJZ6 481 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 MROH6A6NGR9 719 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 GSG1L2A8MUP6 293 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 GOLGA6L22H0YM25 854 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 KLHL18O94889 574 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 MPIG6BO95866 241 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 F2P00734 622 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 CYP1A1P04798 512 aaPredicted RBP4.53□□□□□ -1.68
RBM28-207ENST00000488249 MYCLP1P12525 358 aaPredicted RBP4.53□□□□□ -1.68
RBM28-207ENST00000488249 HOXA5P20719 270 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 KIAA2012Q0VF49 1180 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 ZNF174Q15697 407 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 DPP8Q6V1X1 898 aaPredicted RBP4.53□□□□□ -1.68
RBM28-207ENST00000488249 NXPE1Q8N323 547 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 HIPK4Q8NE63 616 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 LCORQ96JN0 433 aaPredicted RBP4.53□□□□□ -1.68
RBM28-207ENST00000488249 AMNQ9BXJ7 453 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 SLKQ9H2G2 1235 aaPredicted RBP4.53□□□□□ -1.68
RBM28-207ENST00000488249 PCIF1Q9H4Z3 704 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 USP40Q9NVE5 1235 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 IFT57Q9NWB7 429 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 RAPGEFL1Q9UHV5 662 aa4.53□□□□□ -1.68
RBM28-207ENST00000488249 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
RBM28-207ENST00000488249 H0Y858 1186 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 PDE8AO60658 829 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 GAS7O60861 476 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 CLSTN1O94985 981 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 CYP17A1P05093 508 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 ATP2A2P16615 1042 aaKnown RBP4.52□□□□□ -1.69
RBM28-207ENST00000488249 CDK11BP21127 795 aaKnown RBP4.52□□□□□ -1.69
RBM28-207ENST00000488249 ECE1P42892 770 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 FNTBP49356 437 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 DSG1Q02413 1049 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 SKOR2Q2VWA4 1001 aaPredicted RBP4.52□□□□□ -1.69
RBM28-207ENST00000488249 CREB3L3Q68CJ9 461 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 FRMD5Q7Z6J6 570 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 FAM124AQ86V42 546 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 KLHL36Q8N4N3 616 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 KIAA1958Q8N8K9 716 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 NUDT10Q8NFP7 164 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 NUDT11Q96G61 164 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 BTBD2Q9BX70 525 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 OXSMQ9NWU1 459 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 MAPRE3Q9UPY8 281 aa4.52□□□□□ -1.69
RBM28-207ENST00000488249 A0A0G2JLL6 359 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 SLC9A1P19634 815 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 IL13RA1P78552 427 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 NFATC3Q12968 1075 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 STILQ15468 1287 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 LRSAM1Q6UWE0 723 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 Q6ZUG5 572 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 CXXC5Q7LFL8 322 aaKnown RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 RTN4RL1Q86UN2 441 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 CHTF18Q8WVB6 975 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 ERCC4Q92889 916 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 FOXRED1Q96CU9 486 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 MBD6Q96DN6 1003 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 C20orf173Q96LM9 149 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 ELF4Q99607 663 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.51□□□□□ -1.69
RBM28-207ENST00000488249 BARX1Q9HBU1 254 aaPredicted RBP4.51□□□□□ -1.69
RBM28-207ENST00000488249 SPO11Q9Y5K1 396 aa4.51□□□□□ -1.69
RBM28-207ENST00000488249 HMGB1P09429 215 aaKnown RBP4.5□□□□□ -1.69
RBM28-207ENST00000488249 PTX3P26022 381 aaPredicted RBP4.5□□□□□ -1.69
RBM28-207ENST00000488249 POLD1P28340 1107 aa4.5□□□□□ -1.69
RBM28-207ENST00000488249 SCNN1BP51168 640 aa4.5□□□□□ -1.69
RBM28-207ENST00000488249 ALDH6A1Q02252 535 aaKnown RBP4.5□□□□□ -1.69
RBM28-207ENST00000488249 SART3Q15020 963 aaKnown RBP4.5□□□□□ -1.69
RBM28-207ENST00000488249 WDR72Q3MJ13 1102 aa4.5□□□□□ -1.69
RBM28-207ENST00000488249 ZFYVE27Q5T4F4 411 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms