RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 SRGAP2CP0DJJ0 459 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 MYBL2P10244 700 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 PAMP19021 973 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 GRK2P25098 689 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 GRK3P35626 688 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 IARSP41252 1262 aaKnown RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 LIMS1P48059 325 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 CEBPAP49715 358 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 KLF1Q13351 362 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 ARHGAP44Q17R89 818 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 CREB3L3Q68CJ9 461 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 OTOP1Q7RTM1 612 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 HDGFL2Q7Z4V5 671 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 DGKHQ86XP1 1220 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 SAMD3Q8N6K7 520 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 EFHBQ8N7U6 833 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 RCBTB1Q8NDN9 531 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 FBXW5Q969U6 566 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 AHCYL2Q96HN2 611 aaKnown RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 FUBP3Q96I24 572 aaKnown RBP eCLIP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 ADAM7Q9H2U9 754 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 PDLIM7Q9NR12 457 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 DBR1Q9UK59 544 aaKnown RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 PNMA8BQ9ULN7 279 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 LUC7L2Q9Y383 392 aaKnown RBP5.88□□□□□ -1.47
VPS13A-211ENST00000484581 COMMD10Q9Y6G5 202 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
VPS13A-211ENST00000484581 PTPDC1A2A3K4 754 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 FAM47E-STBD1D6RA91 191 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 SNUPNO95149 360 aaKnown RBP5.87□□□□□ -1.47
VPS13A-211ENST00000484581 TBC1D8O95759 1140 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 CT47B1P0C2W7 299 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-211ENST00000484581 MSL3P1P0C860 447 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 PLP2Q04941 152 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-211ENST00000484581 PPP4R4Q6NUP7 873 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 C16orf59Q7L2K0 433 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 TP53I13Q8NBR0 393 aaPredicted RBP5.87□□□□□ -1.47
VPS13A-211ENST00000484581 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 SLC5A5Q92911 643 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 BORCS6Q96GS4 357 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 SLC39A13Q96H72 371 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 IPPKQ9H8X2 491 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 IP6K2Q9UHH9 426 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 IRS2Q9Y4H2 1338 aa5.87□□□□□ -1.47
VPS13A-211ENST00000484581 NPHP3-ACAD11A0A0J9YXS1 232 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 F8W031 263 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-211ENST00000484581 FFAR3O14843 346 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 FGF10O15520 208 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-211ENST00000484581 MYO1BO43795 1136 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 MT-CO1P00395 513 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 ADRB1P08588 477 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 DBHP09172 617 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 RECQLP46063 649 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-211ENST00000484581 DNM2P50570 870 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 SLURP1P55000 103 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 ST5P78524 1137 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 FOXO4P98177 505 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 CAP1Q01518 475 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 BRD3Q15059 726 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 SYCP2LQ5T4T6 812 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 GGNQ86UU5 652 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 CISD2Q8N5K1 135 aaKnown RBP5.86□□□□□ -1.47
VPS13A-211ENST00000484581 C2orf69Q8N8R5 385 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 C1orf162Q8NEQ5 155 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-211ENST00000484581 FBXO41Q8TF61 875 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 VTA1Q9NP79 307 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 GIT1Q9Y2X7 761 aa5.86□□□□□ -1.47
VPS13A-211ENST00000484581 SRGAP3O43295 1099 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 CFBP00751 764 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 RBP3P10745 1247 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 CCND1P24385 295 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 IGFBP6P24592 240 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-211ENST00000484581 GTF2A2P52657 109 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 PRR5P85299 388 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
VPS13A-211ENST00000484581 PURAQ00577 322 aaKnown RBP5.85□□□□□ -1.47
VPS13A-211ENST00000484581 TCIRG1Q13488 830 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 DDB1Q16531 1140 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 INF2Q27J81 1249 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 SLC4A10Q6U841 1118 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 CPA6Q8N4T0 437 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
VPS13A-211ENST00000484581 BOCQ9BWV1 1114 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 USP40Q9NVE5 1235 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 C14orf119Q9NWQ9 140 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 OXSMQ9NWU1 459 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 OBP2AQ9NY56 170 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 ANKRD6Q9Y2G4 727 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 PCDHA2Q9Y5H9 948 aa5.85□□□□□ -1.47
VPS13A-211ENST00000484581 VSTM5A8MXK1 200 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 H7C1D1 291 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 PF4V1P10720 104 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 TACR1P25103 407 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 LACTBP83111 547 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-211ENST00000484581 LSAMPQ13449 338 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 CRY1Q16526 586 aa5.84□□□□□ -1.47
VPS13A-211ENST00000484581 MINDY4Q4G0A6 757 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms