RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RAD51AP2Q09MP3 1159 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 DMP1Q13316 513 aaPredicted RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 ALDH1L2Q3SY69 923 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SLFN12Q8IYM2 578 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RDH13Q8NBN7 331 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TRIM58Q8NG06 486 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 URGCPQ8TCY9 931 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 POP5Q969H6 163 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 AP1S3Q96PC3 154 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RAD21L1Q9H4I0 556 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 DOLKQ9UPQ8 538 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SOS1Q07889 1333 aaPredicted RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 RHPN2P1A8MT19 583 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TALDO1P37837 337 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TRAP1Q12931 704 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 SUZ12Q15022 739 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 MEA1Q16626 185 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ME3Q16798 604 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TMC5Q6UXY8 1006 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ARHGEF18Q6ZSZ5 1173 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 XXYLT1Q8NBI6 393 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ACAP3Q96P50 834 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 LSG1Q9H089 658 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 SNRKQ9NRH2 765 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 SPEF1Q9Y4P9 236 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 KPNA7A9QM74 516 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ANGPT2O15123 496 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 FAM200BP0CF97 657 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ALCAMQ13740 583 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TMED2Q15363 201 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 USPL1Q5W0Q7 1092 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 PPHLN1Q8NEY8 458 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 B4GALNT2Q8NHY0 566 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CCDC51Q96ER9 411 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 MTA3Q9BTC8 594 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ADI1Q9BV57 179 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 FICDQ9BVA6 458 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 C1orf112Q9NSG2 853 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 AMFRQ9UKV5 643 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 VPS9D1Q9Y2B5 631 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CFAP65Q6ZU64 1925 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 ADCY5O95622 1261 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TBC1D8BQ0IIM8 1120 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 MORF4L2Q15014 288 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CARTPTQ16568 116 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CARD16Q5EG05 197 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ZNF530Q6P9A1 599 aaPredicted RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 ABRAXAS1Q6UWZ7 409 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 CFAP61Q8NHU2 1237 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 RBM17Q96I25 401 aaKnown RBP5.8□□□□□ -1.48
USF3-202ENST00000478658 S100A13Q99584 98 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 THTPAQ9BU02 230 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 AP5M1Q9H0R1 490 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 EPN3Q9H201 632 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 TTLL3Q9Y4R7 772 aa5.8□□□□□ -1.48
USF3-202ENST00000478658 ARL3P36405 182 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HIRAP54198 1017 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 CBFBQ13951 182 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 GIMAP8Q8ND71 665 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 RNF139Q8WU17 664 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 TFB1MQ8WVM0 346 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 CASP10Q92851 521 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 TESCQ96BS2 214 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 NACC1Q96RE7 527 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 NLNQ9BYT8 704 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PHACTR1Q9C0D0 580 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 DDX21Q9NR30 783 aaKnown RBP eCLIP5.79□□□□□ -1.48
USF3-202ENST00000478658 TRPM5Q9NZQ8 1165 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 VPS54Q9P1Q0 977 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SCAF8Q9UPN6 1271 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 NPHP3Q7Z494 1330 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SPAG7O75391 227 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ATP6V1C1P21283 382 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PIK3R1P27986 724 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SOX5P35711 763 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 GFPT1Q06210 699 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 STK3Q13188 491 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CAMK1Q14012 370 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PTGES3Q15185 160 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 SNCBQ16143 134 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 NEK10Q6ZWH5 1172 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PRUNE1Q86TP1 453 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 CCDC105Q8IYK2 499 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 NCLNQ969V3 563 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HES6Q96HZ4 224 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HDAC6Q9UBN7 1215 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 HECW1Q76N89 1606 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PSMD3O43242 534 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 KDM4AO75164 1064 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 ANP32DO95626 131 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 EPHB1P54762 984 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 MECOMQ03112 1051 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 NCF4Q15080 339 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 SHROOM1Q2M3G4 852 aaPredicted RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 INTS11Q5TA45 600 aaKnown RBP5.79□□□□□ -1.48
USF3-202ENST00000478658 BSNDQ8WZ55 320 aa5.79□□□□□ -1.48
USF3-202ENST00000478658 PAGE5Q96GU1 130 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms