RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 CETN3O15182 167 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 FNTAP49354 379 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 SMTNP53814 917 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 MARSP56192 900 aaKnown RBP15.3■□□□□ 0.04
ABCF3-210ENST00000473311 SKOR1P84550 965 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 GABPAQ06546 454 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 HYIQ5T013 277 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 INPP4AQ96PE3 977 aaPredicted RBP15.3■□□□□ 0.04
ABCF3-210ENST00000473311 KCTD10Q9H3F6 313 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 PCDHA2Q9Y5H9 948 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L15C9J2P7 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L13C9JLJ4 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L11C9JVI0 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L18D6R9N7 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 ZBTB5O15062 677 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 RAD21O60216 631 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 CYP11B2P19099 503 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 NR2F2P24468 414 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 USP17L6PQ6QN14 398 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 KLHL7Q8IXQ5 586 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
ABCF3-210ENST00000473311 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 C6orf229H3BNL8 230 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 ACTN1P12814 892 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 TNNC1P63316 161 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 GTF2IP78347 998 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 PDCD2Q16342 344 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-210ENST00000473311 CEP85LQ5SZL2 805 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 PRR5LQ6MZQ0 368 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 IQCKQ8N0W5 287 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 SPAG5Q96R06 1193 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 GANQ9H2C0 597 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 CPSF2Q9P2I0 782 aaKnown RBP15.29■□□□□ 0.04
ABCF3-210ENST00000473311 IGKV6D-41A0A0C4DH26 115 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 ZNF233A6NK53 670 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 KCNK3O14649 394 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 STAT3P40763 770 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 CLNS1AP54105 237 aaKnown RBP15.29■□□□□ 0.04
ABCF3-210ENST00000473311 TRADDQ15628 312 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 USP38Q8NB14 1042 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 HDAC9Q9UKV0 1011 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-210ENST00000473311 BTAF1O14981 1849 aa15.29■□□□□ 0.04
ABCF3-210ENST00000473311 NDUFAB1O14561 156 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 RAD51CO43502 376 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 ZEB2O60315 1214 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 RPS6KA1Q15418 735 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 CDC37Q16543 378 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 PTPROQ16827 1216 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 ZC3H12AQ5D1E8 599 aaKnown RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 GOLPH3Q9H4A6 298 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 PTK2Q05397 1052 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 DRP2Q13474 957 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
ABCF3-210ENST00000473311 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 POTEEQ6S8J3 1075 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
ABCF3-210ENST00000473311 FOCADQ5VW36 1801 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 MED24O75448 989 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 SLC9A1P19634 815 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 WHAMMQ8TF30 809 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 TCP11Q8WWU5 503 aa15.27■□□□□ 0.04
ABCF3-210ENST00000473311 NAP1L4Q99733 375 aaKnown RBP15.27■□□□□ 0.04
ABCF3-210ENST00000473311 KDM4FA0A1W2PPD8 638 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 SLC8A1P32418 973 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 CASP5P51878 434 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 EDRF1Q3B7T1 1238 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 MAATS1Q7Z4T9 603 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 DNAAF5Q86Y56 855 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 MREGQ8N565 214 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 ARMCX3Q9UH62 379 aaPredicted RBP15.27■□□□□ 0.03
ABCF3-210ENST00000473311 ATAD5Q96QE3 1844 aa15.27■□□□□ 0.03
ABCF3-210ENST00000473311 ARSHQ5FYA8 562 aa15.26■□□□□ 0.03
ABCF3-210ENST00000473311 FAM196AQ6ZSG2 479 aa15.26■□□□□ 0.03
ABCF3-210ENST00000473311 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
ABCF3-210ENST00000473311 PIK3R5Q8WYR1 880 aa15.26■□□□□ 0.03
ABCF3-210ENST00000473311 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
ABCF3-210ENST00000473311 DHX36Q9H2U1 1008 aaKnown RBP15.26■□□□□ 0.03
ABCF3-210ENST00000473311 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms