RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DTHD1Q6ZMT9 781 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM126BQ8IXS8 530 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 C7orf31Q8N865 590 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 ATP8B4Q8TF62 1192 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 VTI1AQ96AJ9 217 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 GABBR1Q9UBS5 961 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 GTF2IRD1Q9UHL9 959 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 TRANK1O15050 2925 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 NRCAMQ92823 1304 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 P4HBP07237 508 aaKnown RBP16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 TECP42680 631 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 PSMC5P62195 406 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 PLCB4Q15147 1175 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM167AQ96KS9 214 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 HSD17B14Q9BPX1 270 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 RNPEPQ9H4A4 650 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 STK24Q9Y6E0 443 aa16.77■□□□□ 0.28
CDC42SE1-203ENST00000470278 COL1A2P08123 1366 aa16.77■□□□□ 0.27
CDC42SE1-203ENST00000470278 ZNF862O60290 1169 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 DKC1O60832 514 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 YEATS4O95619 227 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 CD4P01730 458 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 SMIM10L2AP0DMW4 78 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 SMIM10L2BP0DMW5 78 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 ATP4AP20648 1035 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 MARK3P27448 753 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 SLC39A14Q15043 492 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 IL17AQ16552 155 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 UGCGQ16739 394 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 HAUS3Q68CZ6 603 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 AK8Q96MA6 479 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 EIF2AK1Q9BQI3 630 aaKnown RBP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 LXNQ9BS40 222 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 COL25A1Q9BXS0 654 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 HDAC6Q9UBN7 1215 aa16.76■□□□□ 0.27
CDC42SE1-203ENST00000470278 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 HBP1O60381 514 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 PQBP1O60828 265 aaKnown RBP16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 LYPLA2O95372 231 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 OATP04181 439 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 GNAT1P11488 350 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 MUTP22033 750 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 ADAM17P78536 824 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 PRKCEQ02156 737 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 PPFIA1Q13136 1202 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 FAM47CQ5HY64 1035 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 C4orf19Q8IY42 314 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 LMBR1Q8WVP7 490 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 IPO9Q96P70 1041 aaKnown RBP16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 TUFT1Q9NNX1 390 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 PRDM5Q9NQX1 630 aaPredicted RBP16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 LRWD1Q9UFC0 647 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 TRPC6Q9Y210 931 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 ARID2Q68CP9 1835 aa16.75■□□□□ 0.27
CDC42SE1-203ENST00000470278 LOXHD1Q8IVV2 1947 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 C17orf102A2RUQ5 167 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 RRN3P2A6NIE6 340 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 B4GALT4O60513 344 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 SLITRK3O94933 977 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 RPA1P27694 616 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 LONP1P36776 959 aaKnown RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 GDF6Q6KF10 455 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 DYDC2Q96IM9 177 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 CTAGE1Q96RT6 745 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 WRAP73Q9P2S5 460 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 KAT6AQ92794 2004 aa16.74■□□□□ 0.27
CDC42SE1-203ENST00000470278 NCOR1O75376 2440 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 SLC26A4O43511 780 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 PPP6R2O75170 966 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 STBD1O95210 358 aa16.73■□□□□ 0.27
CDC42SE1-203ENST00000470278 CLTBP09497 229 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms