RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SUSD6Q92537 303 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 CDCA3Q99618 268 aaPredicted RBP21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 TMEM260Q9NX78 707 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 TRPC6Q9Y210 931 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 SQORQ9Y6N5 450 aa21.81■■□□□ 1.08
NCKIPSD-209ENST00000470006 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 TBKBP1A7MCY6 615 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 IFIT3O14879 490 aaKnown RBP21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 CYTH3O43739 400 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 ATP9AO75110 1047 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 INSRRP14616 1297 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 NFX1Q12986 1120 aaKnown RBP21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 DUSP6Q16828 381 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 LLGL2Q6P1M3 1020 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 CRIPAKQ8N1N5 446 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 VN1R2Q8NFZ6 395 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 ATP8B4Q8TF62 1192 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 CDHR1Q96JP9 859 aa21.8■■□□□ 1.08
NCKIPSD-209ENST00000470006 RIF1Q5UIP0 2472 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 HIP1O00291 1037 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 GALR2O43603 387 aaPredicted RBP21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 FGF18O76093 207 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 NUBP1P53384 320 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 ERVFC1P60507 584 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 TMEM266Q2M3C6 531 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 ASCL5Q7RTU5 278 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 TNPO1Q92973 898 aaKnown RBP21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 GINS2Q9Y248 185 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 PLXNA3P51805 1871 aa21.79■■□□□ 1.08
NCKIPSD-209ENST00000470006 KCNA2P16389 499 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 PLPP4Q5VZY2 271 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 KREMEN2Q8NCW0 462 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 GPRASP2Q96D09 838 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 CELF4Q9BZC1 486 aaKnown RBP21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 AZI2Q9H6S1 392 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 NR2E1Q9Y466 385 aa21.78■■□□□ 1.08
NCKIPSD-209ENST00000470006 MYO15AQ9UKN7 3530 aa21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 DENND3A2RUS2 1198 aa21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 SARSP49591 514 aaKnown RBP21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 WTAPQ15007 396 aa21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 PDE12Q6L8Q7 609 aaKnown RBP21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 ANKRD54Q6NXT1 300 aa21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 ENTPD7Q9NQZ7 604 aa21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
NCKIPSD-209ENST00000470006 IGSF9BQ9UPX0 1349 aa21.77■■□□□ 1.07
NCKIPSD-209ENST00000470006 MYO10Q9HD67 2058 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 PROB1E7EW31 1015 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 KRT76Q01546 638 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 APOBRQ0VD83 1088 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 MTMR1Q13613 665 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 CATIPQ7Z7H3 387 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 TRAPPC12Q8WVT3 735 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 RRP36Q96EU6 259 aaKnown RBP21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 S1PR5Q9H228 398 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 TMX1Q9H3N1 280 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 PUF60Q9UHX1 559 aaKnown RBP21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 PCDHA2Q9Y5H9 948 aa21.76■■□□□ 1.07
NCKIPSD-209ENST00000470006 FNDC1Q4ZHG4 1894 aaPredicted RBP21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 FAM186AA6NE01 2351 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 PRR23AA6NEV1 266 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 MTMR3Q13615 1198 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 SART3Q15020 963 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 FAM102BQ5T8I3 360 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 COLGALT1Q8NBJ5 622 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 SENP2Q9HC62 589 aa21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 TYW1Q9NV66 732 aaKnown RBP21.75■■□□□ 1.07
NCKIPSD-209ENST00000470006 MEIS2O14770 477 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 ITGB5P18084 799 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 UBALD2Q8IYN6 164 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 ADAM2Q99965 735 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 TCF25Q9BQ70 676 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 MFSD1Q9H3U5 465 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 HCSTQ9UBK5 93 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 SORCS3Q9UPU3 1222 aa21.74■■□□□ 1.07
NCKIPSD-209ENST00000470006 PIK3CDO00329 1044 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 RPS6KA5O75582 802 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 TROAPQ12815 778 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 CES5AQ6NT32 575 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 SYCE2Q6PIF2 218 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 TMEM184AQ6ZMB5 413 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 RALYLQ86SE5 291 aaKnown RBP21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 NME8Q8N427 588 aa21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 JPH1Q9HDC5 661 aaPredicted RBP21.73■■□□□ 1.07
NCKIPSD-209ENST00000470006 FSCN2O14926 492 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 HOXB8P17481 243 aaPredicted RBP21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 LAG3P18627 525 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 CA8P35219 290 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 NBL1P41271 181 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 PLCB4Q15147 1175 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 TMEM105Q8N8V8 129 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 MRPS27Q92552 414 aaKnown RBP21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 PCYT2Q99447 389 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 PSTPIP2Q9H939 334 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 ATP6V0A4Q9HBG4 840 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 C1orf112Q9NSG2 853 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 SLC9A2Q9UBY0 812 aa21.72■■□□□ 1.07
NCKIPSD-209ENST00000470006 SMIM35A0A1B0GVV1 85 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms