RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TMC3Q7Z5M5 1100 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 TEX11Q8IYF3 940 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 RASGEF1CQ8N431 466 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 RAPGEF5Q92565 580 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 SPAG5Q96R06 1193 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CXorf56Q9H5V9 222 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 C5orf60A6NFR6 353 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CHUKO15111 745 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CETN3O15182 167 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 TTI1O43156 1089 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 PAEPP09466 180 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 NR2F2P24468 414 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 PON1P27169 355 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 ARSHQ5FYA8 562 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 SEC16BQ96JE7 1060 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 C8orf37Q96NL8 207 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CELF4Q9BZC1 486 aaKnown RBP14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 GPCPD1Q9NPB8 672 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 NHSQ6T4R5 1651 aa14.19□□□□□ -0.14
PDZRN3-205ENST00000466780 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 CCDC188H7C350 402 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 PRKCIP41743 596 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 SEC14L1Q92503 715 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 NT5C3AQ9H0P0 336 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 JMJD4Q9H9V9 463 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 GPR75-ASB3A0A0A6YYF3 556 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 RHBDL3P58872 404 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 MAGOHP61326 146 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 PEX26Q7Z412 305 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 MAGOHBQ96A72 148 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 NGLY1Q96IV0 654 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 CCDC114Q96M63 670 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 ACTR5Q9H9F9 607 aaPredicted RBP14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 MTMR4Q9NYA4 1195 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 BZW2Q9Y6E2 419 aaKnown RBP14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
PDZRN3-205ENST00000466780 KDM3AQ9Y4C1 1321 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 F8VZ95 297 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 MARCH6O60337 910 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 RPS6KA4O75676 772 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 HOXD13P35453 343 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 MTMR3Q13615 1198 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 NFIXQ14938 502 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 ASPRV1Q53RT3 343 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 ODF2Q5BJF6 829 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 NT5DC3Q86UY8 548 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 TATDN2Q93075 761 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 ZHX3Q9H4I2 956 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 KIF13BQ9NQT8 1826 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 ARFGEF1Q9Y6D6 1849 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 AFPP02771 609 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 POU5F1Q01860 360 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 DHX9Q08211 1270 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 EXOC3L4Q17RC7 722 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 FRMD5Q7Z6J6 570 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 DPH5Q9H2P9 285 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 SIX2Q9NPC8 291 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 ARMCX3Q9UH62 379 aaPredicted RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 NR2E1Q9Y466 385 aa14.17□□□□□ -0.14
PDZRN3-205ENST00000466780 PNMA6FA0A0J9YX94 578 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 DDX3XO00571 662 aaKnown RBP eCLIP14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 MED24O75448 989 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 SLC12A3P55017 1021 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 EPHA7Q15375 998 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 KRT71Q3SY84 523 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 TTBK2Q6IQ55 1244 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 ADGRF4Q8IZF3 695 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 FUKQ8N0W3 1084 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 GOLGA6L7A0A1B0GV03 622 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 PHF20L1A8MW92 1017 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 FLOT1O75955 427 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 H2AFZP0C0S5 128 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 DRD4P21917 467 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 STAT3P40763 770 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 PREPLQ4J6C6 727 aaPredicted RBP14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 PPP1R18Q6NYC8 613 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 CYB5D1Q6P9G0 228 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 GJB7Q6PEY0 223 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 H2AFVQ71UI9 128 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 HES6Q96HZ4 224 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 TRIM51Q9BSJ1 452 aa14.16□□□□□ -0.14
PDZRN3-205ENST00000466780 TXLNGYQ9BZA5 131 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms