RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RASA3Q14644 834 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 RAB3GAP1Q15042 981 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 NTRK3Q16288 839 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 CERKLQ49MI3 558 aaPredicted RBP6.36□□□□□ -1.39
VPS41-211ENST00000466017 FAM47AQ5JRC9 791 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.36□□□□□ -1.39
VPS41-211ENST00000466017 TMEM179Q6ZVK1 233 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 CATIPQ7Z7H3 387 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 PNMA8AQ86V59 439 aaPredicted RBP6.36□□□□□ -1.39
VPS41-211ENST00000466017 CCDC83Q8IWF9 413 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 ZSCAN29Q8IWY8 852 aaPredicted RBP6.36□□□□□ -1.39
VPS41-211ENST00000466017 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 NSUN7Q8NE18 718 aaKnown RBP6.36□□□□□ -1.39
VPS41-211ENST00000466017 FBLIM1Q8WUP2 373 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 LZTS2Q9BRK4 669 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 DEFB129Q9H1M3 183 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 DNAJC18Q9H819 358 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS41-211ENST00000466017 CABP5Q9NP86 173 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 TOMM22Q9NS69 142 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 STOML1Q9UBI4 398 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 HACL1Q9UJ83 578 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 KIF3AQ9Y496 699 aa6.36□□□□□ -1.39
VPS41-211ENST00000466017 STK36Q9NRP7 1315 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 SHTN1A0MZ66 631 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 CLRN2A0PK11 232 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 TCP10L2B9ZVM9 353 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 CTNND1O60716 968 aaKnown RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 CTDNEP1O95476 244 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 TTLL1O95922 423 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 AKR1B1P15121 316 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 KIF5BP33176 963 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 GUCY1A2P33402 732 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 ADMP35318 185 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 CAP2P40123 477 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 METAP2P50579 478 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS41-211ENST00000466017 CACNB3P54284 484 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 SUPT20HL1Q3ZLR7 823 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 TBC1D10BQ4KMP7 808 aaPredicted RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 DCAF15Q66K64 600 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 ANKRD34AQ69YU3 496 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 FDX2Q6P4F2 183 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 NFXL1Q6ZNB6 911 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 NPAS4Q8IUM7 802 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 CRACR2BQ8N4Y2 399 aaPredicted RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 SLC44A5Q8NCS7 719 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 FAM161BQ96MY7 647 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 TMEM47Q9BQJ4 181 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 WDR18Q9BV38 432 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 CEP41Q9BYV8 373 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 KCNF1Q9H3M0 494 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 FAM105AQ9NUU6 356 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 ACTL7BQ9Y614 415 aa6.35□□□□□ -1.39
VPS41-211ENST00000466017 GREB1LQ9C091 1923 aaPredicted RBP6.35□□□□□ -1.39
VPS41-211ENST00000466017 SCN4AP35499 1836 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 WDR33Q9C0J8 1336 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 PRR19A6NJB7 356 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 ENC1O14682 589 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 CPLX1O14810 134 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 DHX15O43143 795 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 SART1O43290 800 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 PRPF3O43395 683 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 PLA2G6O60733 806 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 AOC2O75106 756 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 TGFB1P01137 390 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 ASNSP08243 561 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 ADH5P11766 374 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 FDPSP14324 419 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 SYT1P21579 422 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 BMP6P22004 513 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 MAP4P27816 1152 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 GJB2P29033 226 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 EPHX2P34913 555 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 GRM4Q14833 912 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 MAP3K11Q16584 847 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 ABCB5Q2M3G0 1257 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 NBPF11Q86T75 865 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 SIAH1Q8IUQ4 282 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 TEX2Q8IWB9 1127 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 STK11IPQ8N1F8 1099 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 GMCL1P1Q8NEA9 526 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 CTCFLQ8NI51 663 aaPredicted RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 WASF1Q92558 559 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 CEP95Q96GE4 821 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 FAM83CQ9BQN1 747 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 ZNF341Q9BYN7 854 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 TMEM39BQ9GZU3 492 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 TAF1DQ9H5J8 278 aaPredicted RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 GPN3Q9UHW5 284 aaPredicted RBP6.34□□□□□ -1.39
VPS41-211ENST00000466017 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
VPS41-211ENST00000466017 SIPA1L1O43166 1804 aa6.34□□□□□ -1.4
VPS41-211ENST00000466017 GOLGA8AA7E2F4 631 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms