RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 GNAQP50148 359 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 PTPN5P54829 565 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 PKN1Q16512 942 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 UBE2SQ16763 222 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 RBM23Q86U06 439 aaKnown RBP16.74■□□□□ 0.27
MCF2L-220ENST00000464800 SUGP1Q8IWZ8 645 aaKnown RBP16.74■□□□□ 0.27
MCF2L-220ENST00000464800 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 PBXIP1Q96AQ6 731 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
MCF2L-220ENST00000464800 JADE2Q9NQC1 790 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 SLC9A2Q9UBY0 812 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 LRFN2Q9ULH4 789 aa16.74■□□□□ 0.27
MCF2L-220ENST00000464800 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-220ENST00000464800 USP15Q9Y4E8 981 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-220ENST00000464800 MAFGO15525 162 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 PLEKHA8P1O95397 391 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 GLP2RO95838 553 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 PRSS33Q8NF86 280 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 PCYT2Q99447 389 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 PRRX2Q99811 253 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 CELF4Q9BZC1 486 aaKnown RBP16.73■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
MCF2L-220ENST00000464800 IBSPP21815 317 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-220ENST00000464800 CHMLP26374 656 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 GATMP50440 423 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 ZXDAP98168 799 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 CBX2Q14781 532 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-220ENST00000464800 NFXL1Q6ZNB6 911 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 CMTR1Q8N1G2 835 aaKnown RBP16.72■□□□□ 0.27
MCF2L-220ENST00000464800 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
MCF2L-220ENST00000464800 TRAPPC12Q8WVT3 735 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 PHOX2BQ99453 314 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 TLE6Q9H808 572 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHA6Q9UN73 950 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHA8Q9Y5H6 950 aa16.72■□□□□ 0.27
MCF2L-220ENST00000464800 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 FSD2A1L4K1 749 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 CCDC69A6NI79 296 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 SARSP49591 514 aaKnown RBP16.71■□□□□ 0.27
MCF2L-220ENST00000464800 ACTR2P61160 394 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 KRT76Q01546 638 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 UBE3AQ05086 875 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 PLCB4Q15147 1175 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 SPOUT1Q5T280 376 aaKnown RBP16.71■□□□□ 0.27
MCF2L-220ENST00000464800 NME8Q8N427 588 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 MICAL1Q8TDZ2 1067 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 SDF4Q9BRK5 362 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 MTA3Q9BTC8 594 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 PHF7Q9BWX1 381 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-220ENST00000464800 TMX1Q9H3N1 280 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 TLR9Q9NR96 1032 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 AAASQ9NRG9 546 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 KCNH7Q9NS40 1196 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 PCDHB12Q9Y5F1 795 aa16.71■□□□□ 0.27
MCF2L-220ENST00000464800 NFASCO94856 1347 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 SMIM35A0A1B0GVV1 85 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 SGSM2O43147 1006 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 PRC1O43663 620 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 CALM1P0DP23 149 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 CALM2P0DP24 149 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 CALM3P0DP25 149 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 RXRAP19793 462 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 PDE4AP27815 886 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 STAT5BP51692 787 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 NFX1Q12986 1120 aaKnown RBP16.7■□□□□ 0.26
MCF2L-220ENST00000464800 TMEM266Q2M3C6 531 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 IER5LQ5T953 404 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 MTHFD1LQ6UB35 978 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 PLPPR4Q7Z2D5 763 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 HEATR3Q7Z4Q2 680 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 FBXL6Q8N531 539 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 RPGRIP1Q96KN7 1286 aa16.7■□□□□ 0.26
MCF2L-220ENST00000464800 RBM8AQ9Y5S9 174 aaKnown RBP16.7■□□□□ 0.26
MCF2L-220ENST00000464800 EVPLQ92817 2033 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 hCG_1642624A0A1W2PR95 340 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 SH2B2O14492 632 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-220ENST00000464800 ATF7P17544 494 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-220ENST00000464800 MCM5P33992 734 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 SIGLEC14Q08ET2 396 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 FAM43BQ6ZT52 329 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-220ENST00000464800 MAP4K1Q92918 833 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 TMEM87BQ96K49 555 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 NEK1Q96PY6 1258 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 CDCA3Q99618 268 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-220ENST00000464800 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 C1orf112Q9NSG2 853 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 GINS2Q9Y248 185 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 ZDBF2Q9HCK1 2354 aa16.69■□□□□ 0.26
MCF2L-220ENST00000464800 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
MCF2L-220ENST00000464800 TBKBP1A7MCY6 615 aa16.68■□□□□ 0.26
MCF2L-220ENST00000464800 PER2O15055 1255 aa16.68■□□□□ 0.26
MCF2L-220ENST00000464800 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
MCF2L-220ENST00000464800 FGF18O76093 207 aa16.68■□□□□ 0.26
MCF2L-220ENST00000464800 SRGAP2BP0DMP2 458 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms