RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 OSGEPQ9NPF4 335 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 PON1P27169 355 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 SHMT1P34896 483 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 HOXD13P35453 343 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 IFT88Q13099 833 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 PLS1Q14651 629 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 CERS5Q8N5B7 392 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 EFCC1Q9HA90 598 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 GCNT4Q9P109 453 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 CHORDC1Q9UHD1 332 aaPredicted RBP21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 SBF2Q86WG5 1849 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 COL5A3P25940 1745 aaPredicted RBP21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 GOLGA6L10A6NI86 522 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 DCDC2CA8MYV0 355 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 TTI1O43156 1089 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 EPB41P11171 864 aaKnown RBP21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 ATP6V1G3Q96LB4 118 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 EDEM3Q9BZQ6 932 aa21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 NUCKS1Q9H1E3 243 aaKnown RBP21.4■■□□□ 1.02
CNEP1R1-203ENST00000458059 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 UBXN2AP68543 259 aa21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 BARGINQ6ZT62 677 aa21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 RDH13Q8NBN7 331 aa21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 TRIM51Q9BSJ1 452 aa21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 TAF1DQ9H5J8 278 aaPredicted RBP21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 NR2E1Q9Y466 385 aa21.39■■□□□ 1.02
CNEP1R1-203ENST00000458059 SMIM23A6NLE4 172 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 AFPP02771 609 aaKnown RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 SKOR1P84550 965 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 LLGL1Q15334 1064 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 AIPL1Q9NZN9 384 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 FBXL5Q9UKA1 691 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 CDK5RAP2Q96SN8 1893 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 KDM3AQ9Y4C1 1321 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 SMARCA1P28370 1054 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 MNAT1P51948 309 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 SLC12A3P55017 1021 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF211Q13398 564 aaPredicted RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 MKRN4PQ13434 485 aaPredicted RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 GIT2Q14161 759 aa21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 UAP1Q16222 522 aaPredicted RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZC2HC1CQ53FD0 456 aaPredicted RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF473Q8WTR7 871 aaKnown RBP21.39■■□□□ 1.01
CNEP1R1-203ENST00000458059 PPP1R37O75864 691 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 GDF11O95390 407 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 SNHG28P0DPA3 235 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 IL1R1P14778 569 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 ATP2B4P23634 1241 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 GABPAQ06546 454 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 ORC2Q13416 577 aaPredicted RBP21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 CHADLQ6NUI6 762 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 CCT8L2Q96SF2 557 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 RUSC1Q9BVN2 902 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 GNA14O95837 355 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 COG2Q14746 738 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 SPICE1Q8N0Z3 855 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 UHMK1Q8TAS1 419 aaKnown RBP21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 KCNQ5Q9NR82 932 aa21.38■■□□□ 1.01
CNEP1R1-203ENST00000458059 CTTNQ14247 550 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 KNOP1Q1ED39 458 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 SYN2Q92777 582 aaPredicted RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 FAM86B1E9PN63 330 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 SERPINB2P05120 415 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 FAM86B2P0C5J1 330 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 EEF2P13639 858 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 TNFRSF8P28908 595 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 ECHS1P30084 290 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 NMT1P30419 496 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 ARHGAP4P98171 946 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 PTGISQ16647 500 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 RC3H1Q5TC82 1133 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 KDM7AQ6ZMT4 941 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 NLRP14Q86W24 1093 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 SLF2Q8IX21 1173 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 DHX37Q8IY37 1157 aaKnown RBP21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 GOPCQ9HD26 462 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 RNF14Q9UBS8 474 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 DNM3Q9UQ16 869 aa21.37■■□□□ 1.01
CNEP1R1-203ENST00000458059 GCOM1H8Y6P7 765 aaPredicted RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 hCG_1984214I3L0E3 225 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 NR3C1P04150 777 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 MYZAPP0CAP1 466 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 MDH1P40925 334 aaKnown RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 USP11P51784 963 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 ZNF713Q8N859 430 aaPredicted RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 TPCN2Q8NHX9 752 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 HNRNPH1P31943 449 aaKnown RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 ARHGAP44Q17R89 818 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 MAEAQ7L5Y9 396 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 MYCBPAPQ8TBZ2 947 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 WHAMMQ8TF30 809 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 EPN3Q9H201 632 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 NOVA2Q9UNW9 492 aaKnown RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 GAKO14976 1311 aa21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 PGRMC1O00264 195 aaKnown RBP21.36■■□□□ 1.01
CNEP1R1-203ENST00000458059 LRRN2O75325 713 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms