RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ADAMTS5Q9UNA0 930 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 SIPA1L1O43166 1804 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 CENPEQ02224 2701 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 MAPK8IP3Q9UPT6 1336 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 MYH2Q9UKX2 1941 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 TNFRSF10BO14763 440 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 KINO60870 393 aaKnown RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 SLC25A27O95847 323 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 ASGR2P07307 311 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 PLA2G2AP14555 144 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 EPB42P16452 691 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 BMPR1AP36894 532 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 BTDP43251 543 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 RIPK4P57078 832 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 ZYXQ15942 572 aaKnown RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 CCDC57Q2TAC2 916 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 SV2AQ7L0J3 742 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 C1orf210Q8IVY1 113 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 VN1R2Q8NFZ6 395 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 DDX1Q92499 740 aaKnown RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 NELL1Q92832 810 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 CRBNQ96SW2 442 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 EPC1Q9H2F5 836 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 ABHD16BQ9H3Z7 469 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 KLK14Q9P0G3 267 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 MICAL3Q7RTP6 2002 aa6.53□□□□□ -1.36
SBDSP1-204ENST00000453858 TANC1Q9C0D5 1861 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 C2CD4DB7Z1M9 353 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 LILRB5O75023 590 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 EFCAB14O75071 495 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 C1QL1O75973 258 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 MICAL2O94851 1124 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 MAP4K4O95819 1239 aaPredicted RBP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 GH2P01242 217 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 FAM157BP0CG42 384 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 PCSK2P16519 638 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 SCNN1AP37088 669 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 RBM25P49756 843 aaKnown RBP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 USP14P54578 494 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 KCNC3Q14003 757 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 CCDC6Q16204 474 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 DBN1Q16643 649 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 ZNF528Q3MIS6 628 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 KIAA1755Q5JYT7 1200 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 TMEM63BQ5T3F8 832 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 SYCE2Q6PIF2 218 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 LRRC69Q6ZNQ3 347 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 SND1Q7KZF4 910 aaKnown RBP eCLIP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 BTLAQ7Z6A9 289 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 RIOX2Q8IUF8 465 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 FOXP4Q8IVH2 680 aaPredicted RBP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 ZBTB44Q8NCP5 570 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 TRERF1Q96PN7 1200 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 CITED4Q96RK1 184 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 ZCCHC2Q9C0B9 1178 aaKnown RBP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 GZF1Q9H116 711 aaPredicted RBP6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 USP18Q9UMW8 372 aa6.52□□□□□ -1.37
SBDSP1-204ENST00000453858 APC2O95996 2303 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 ACACAQ13085 2346 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 H3BRB1 525 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 ATXN7O15265 892 aaPredicted RBP6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 MMP1P03956 469 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 GLULP15104 373 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 GUCY1A2P33402 732 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 ARSDP51689 593 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TNFAIP2Q03169 654 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 RBL2Q08999 1139 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TBC1D8BQ0IIM8 1120 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 BFSP2Q13515 415 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 IKBKEQ14164 716 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 PLS1Q14651 629 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 MBTPS1Q14703 1052 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 LRRC24Q50LG9 513 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TMEM184AQ6ZMB5 413 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TREML1Q86YW5 311 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 AFAP1L1Q8TED9 768 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TOP1MTQ969P6 601 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 DMGDHQ9UI17 866 aaKnown RBP6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 ADAMTS8Q9UP79 889 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 PLAGL2Q9UPG8 496 aa6.51□□□□□ -1.37
SBDSP1-204ENST00000453858 MCM3APO60318 1980 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 SCN10AQ9Y5Y9 1956 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 A0A1W2PRG0 241 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 KRBA1A5PL33 1030 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 ARHGAP6O43182 974 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 SP100P23497 879 aaPredicted RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 PPP2R1AP30153 589 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 USP5P45974 858 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 NRIP1P48552 1158 aa6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 PURAQ00577 322 aaKnown RBP6.5□□□□□ -1.37
SBDSP1-204ENST00000453858 C19orf57Q0VDD7 668 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 221.5 ms