RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CACNB2Q08289 660 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 KLF1Q13351 362 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 CR1LQ2VPA4 569 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 INAVAQ3KP66 663 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 CD276Q5ZPR3 534 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 RTF1Q92541 710 aaKnown RBP5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 TOPORSQ9NS56 1045 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 SIRT5Q9NXA8 310 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 FAM53CQ9NYF3 392 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 BTBD7Q9P203 1132 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 ARHGAP28Q9P2N2 729 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 CARMIL2Q6F5E8 1435 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 KDM1AO60341 852 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 MCL1Q07820 350 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 TARBP2Q15633 366 aaKnown RBP5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 RTN4RL1Q86UN2 441 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 CILP2Q8IUL8 1156 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 PHYKPLQ8IUZ5 450 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 C7orf31Q8N865 590 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 ERCC4Q92889 916 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 FOXRED1Q96CU9 486 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 ACAP3Q96P50 834 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 EPB41L4BQ9H329 900 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 MS4A5Q9H3V2 200 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 PCDH18Q9HCL0 1135 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 TCEAL9Q9UHQ7 104 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 EID1Q9Y6B2 187 aa5.85□□□□□ -1.47
HMGB1P16-201ENST00000447155 TNKSO95271 1327 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 SHTN1A0MZ66 631 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PRAMEF22A3QJZ6 481 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZNF839A8K0R7 811 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 MARCH6O60337 910 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PARNO95453 639 aaKnown RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 C8BP07358 591 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 ENO2P09104 434 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 TMEM253P0C7T8 217 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PFKLP17858 780 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PTGS1P23219 599 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 IARSP41252 1262 aaKnown RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 TTC38Q5R3I4 469 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PRAMEF18Q5VWM3 479 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 VASNQ6EMK4 673 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 ESPNLQ6ZVH7 1005 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZBTB46Q86UZ6 589 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 PROSER1Q86XN7 944 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 FAM26EQ8N5C1 309 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 LMBR1Q8WVP7 490 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 DIRC2Q96SL1 478 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 FOXB1Q99853 325 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 NSUN3Q9H649 340 aaKnown RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 DCP1AQ9NPI6 582 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 KCNG1Q9UIX4 513 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 MSRAQ9UJ68 235 aa5.84□□□□□ -1.47
HMGB1P16-201ENST00000447155 TEX51A0A1B0GUA7 166 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 MYOCOSA0A1B0GUC4 107 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 LCHNA4D1U4 455 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 CFBP00751 764 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 MYBL2P10244 700 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 CYP2C8P10632 490 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 MC4RP32245 332 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 SCAND1P57086 179 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 PDCD1Q15116 288 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 PTPN21Q16825 1174 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 ABCB5Q2M3G0 1257 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 TIGD7Q6NT04 549 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 PRR23BQ6ZRT6 265 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 Q8N3U1 123 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 C1orf162Q8NEQ5 155 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 IGDCC4Q8TDY8 1250 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 MAML3Q96JK9 1138 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 TUBGCP5Q96RT8 1024 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 SLC13A1Q9BZW2 595 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 CNTD2Q9H8S5 307 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 SLC39A2Q9NP94 309 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 AASDHPPTQ9NRN7 309 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 UCKL1Q9NWZ5 548 aa5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 MBD1Q9UIS9 605 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P16-201ENST00000447155 E2F8A0AVK6 867 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 TRIM75PA6NK02 468 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 SEMA7AO75326 666 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 MPIG6BO95866 241 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 PRLP01236 227 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 RBP3P10745 1247 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 CDR1P51861 262 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 MANFP55145 182 aaKnown RBP5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 KRT85P78386 507 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 PFKPQ01813 784 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 ALDH6A1Q02252 535 aaKnown RBP5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 ROM1Q03395 351 aa5.82□□□□□ -1.48
HMGB1P16-201ENST00000447155 MOGSQ13724 837 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms