RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 LRRC37BQ96QE4 947 aa17.15■□□□□ 0.34
SIK3-205ENST00000446921 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
SIK3-205ENST00000446921 PITPNM3Q9BZ71 974 aa17.15■□□□□ 0.34
SIK3-205ENST00000446921 CLIC5Q9NZA1 410 aa17.15■□□□□ 0.34
SIK3-205ENST00000446921 TUBGCP4Q9UGJ1 667 aa17.15■□□□□ 0.34
SIK3-205ENST00000446921 EPS15P42566 896 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 SLC9C1Q4G0N8 1177 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 FAAH2Q6GMR7 532 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 AGGF1Q8N302 714 aaeCLIP17.14■□□□□ 0.33
SIK3-205ENST00000446921 RIBC1Q8N443 379 aaPredicted RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 OSBPL10Q9BXB5 764 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 CUEDC2Q9H467 287 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 DNAJC17Q9NVM6 304 aaKnown RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 SALL4Q9UJQ4 1053 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 SNX24Q9Y343 169 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 FOXD4Q12950 439 aaPredicted RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 ITGA7Q13683 1181 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 RTN1Q16799 776 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 POTEEQ6S8J3 1075 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 FAM13CQ8NE31 585 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 CASP10Q92851 521 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 EYA1Q99502 592 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 DCLRE1BQ9H816 532 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 PGRMC1O00264 195 aaKnown RBP17.14■□□□□ 0.33
SIK3-205ENST00000446921 PEX11AO75192 247 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 MMP1P03956 469 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 MTTPP55157 894 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 OR52E8Q6IFG1 317 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 ZNF554Q86TJ5 538 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.14■□□□□ 0.33
SIK3-205ENST00000446921 ABCC1P33527 1531 aa17.14■□□□□ 0.33
SIK3-205ENST00000446921 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
SIK3-205ENST00000446921 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 SLC29A2Q14542 456 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 NME8Q8N427 588 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 OSBP2Q969R2 916 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
SIK3-205ENST00000446921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
SIK3-205ENST00000446921 PYGMP11217 842 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 PMS2P54278 862 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 C6orf118Q5T5N4 469 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 ASAP3Q8TDY4 903 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 PCDH18Q9HCL0 1135 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 TBK1Q9UHD2 729 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 POTEJP0CG39 1038 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 SRGNP10124 158 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 RHBDL3P58872 404 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 MEA1Q16626 185 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 C6orf183Q5T699 404 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
SIK3-205ENST00000446921 PPP1R14BQ96C90 147 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 CCDC61Q9Y6R9 512 aa17.13■□□□□ 0.33
SIK3-205ENST00000446921 A6NJR5 290 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 LMNAP02545 664 aaKnown RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 NEK2P51955 445 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 PTPRN2Q92932 1015 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 TUBA8Q9NY65 449 aaPredicted RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 GRID2IPA4D2P6 1211 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 E7ENQ6 273 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 STK10O94804 968 aaKnown RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 KCNMA1Q12791 1236 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 TMEM53Q6P2H8 277 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 MKL1Q969V6 931 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 CENPTQ96BT3 561 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 LRRC4CQ9HCJ2 640 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 MTRF1LQ9UGC7 380 aaKnown RBP17.12■□□□□ 0.33
SIK3-205ENST00000446921 H0YGN5 161 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 UNC5CO95185 931 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 NAT2P11245 290 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 ANTXR2P58335 489 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 OLFM3Q96PB7 478 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 NFS1Q9Y697 457 aa17.12■□□□□ 0.33
SIK3-205ENST00000446921 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 PDE5AO76074 875 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 FGFR1OPO95684 399 aaKnown RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 KLRC1P26715 233 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 PMS1P54277 932 aaKnown RBP17.11■□□□□ 0.33
SIK3-205ENST00000446921 PTGDRQ13258 359 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 LRRC36Q1X8D7 754 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 KCTD21Q4G0X4 260 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 TTLL11Q8NHH1 800 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 CATSPER2Q96P56 530 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 SPATA16Q9BXB7 569 aa17.11■□□□□ 0.33
SIK3-205ENST00000446921 ADAMTS1Q9UHI8 967 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms