RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ZDHHC15Q96MV8 337 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 TUBB2BQ9BVA1 445 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 JMJD4Q9H9V9 463 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 NRBP2Q9NSY0 501 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 LIMA1Q9UHB6 759 aaKnown RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 NPHP3-ACAD11A0A0J9YXS1 232 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 KIF4AO95239 1232 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 MOCS3O95396 460 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 SARSP49591 514 aaKnown RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 HUNKP57058 714 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 MDM2Q00987 491 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 BAATQ14032 418 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 IFI16Q16666 785 aaKnown RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 C8orf74Q6P047 294 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 RAD54LQ92698 747 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 SLC37A4O43826 429 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 CEP104O60308 925 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 TNFAIP3P21580 790 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 ACTN3Q08043 901 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 KIAA0753Q2KHM9 967 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3B-210ENST00000444502 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
TOP3B-210ENST00000444502 N4BP1O75113 896 aaKnown RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 EZRP15311 586 aaKnown RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ABCB4P21439 1286 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 FUT2Q10981 343 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 NEDD9Q14511 834 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF354CQ86Y25 554 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 NACC1Q96RE7 527 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 SCN11AQ9UI33 1791 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 C5P01031 1676 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 SASH3O75995 380 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 IL1R1P14778 569 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 COASYQ13057 564 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 COG2Q14746 738 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 FAM133AQ8N9E0 248 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 TRIM58Q8NG06 486 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 SELENOOQ9BVL4 669 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 RIC8AQ9NPQ8 531 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 WNT10BO00744 389 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 HSF2BPO75031 334 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF18P17022 549 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 PRPHP41219 470 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 VAV2P52735 878 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 IFFO1Q0D2I5 559 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 KCNB1Q14721 858 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 NSUN6Q8TEA1 469 aaKnown RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 U2AF1L4Q8WU68 220 aaKnown RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 AP5M1Q9H0R1 490 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ATRNO75882 1429 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 RHOBTB3O94955 611 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 TBC1D8O95759 1140 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 TMOD1P28289 359 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 NT5C2P49902 561 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ZNF157P51786 506 aaPredicted RBP11.53□□□□□ -0.56
TOP3B-210ENST00000444502 TUBB4BP68371 445 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 EHHADHQ08426 723 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 BRD3Q15059 726 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 CERS5Q8N5B7 392 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 BCAS4Q8TDM0 211 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 TRIM31Q9BZY9 425 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 ADAMTS1Q9UHI8 967 aa11.53□□□□□ -0.56
TOP3B-210ENST00000444502 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.56
TOP3B-210ENST00000444502 KIF11P52732 1056 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 PMS1P54277 932 aaKnown RBP11.52□□□□□ -0.56
TOP3B-210ENST00000444502 SEMA3FQ13275 785 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 EXOC3L4Q17RC7 722 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 FAM160B1Q5W0V3 765 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 HOMEZQ8IX15 550 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 CDHR1Q96JP9 859 aa11.52□□□□□ -0.56
TOP3B-210ENST00000444502 GOLGA8IPA6NC78 632 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 GOLGA8JA6NMD2 632 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 H3BQF6 201 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 PEX3P56589 373 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 CORO7P57737 925 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 STXBP2Q15833 593 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 RETREG2Q8NC44 543 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-210ENST00000444502 KMT5AQ9NQR1 393 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 LRRC53A6NM62 1247 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 NDUFAB1O14561 156 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 TADA3O75528 432 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 GNA14O95837 355 aa11.52□□□□□ -0.57
TOP3B-210ENST00000444502 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
TOP3B-210ENST00000444502 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms