RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NUP62CLQ9H1M0 184 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 PCIF1Q9H4Z3 704 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 SP110Q9HB58 689 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 USP36Q9P275 1121 aaKnown RBP6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 ADGRE2Q9UHX3 823 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 GJD2Q9UKL4 321 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 DAGLAQ9Y4D2 1042 aa6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 TIMM13Q9Y5L4 95 aaPredicted RBP6.42□□□□□ -1.38
TM9SF3-202ENST00000443638 A0A0A0MRY4 1105 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 A0A1B0GVC2 190 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 RNF225M0QZC1 329 aaPredicted RBP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 MYO1BO43795 1136 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 TBC1D8O95759 1140 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 AGR2O95994 175 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 ALDH2P05091 517 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 KRT15P19012 456 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 RAB6AP20340 208 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 HTR1BP28222 390 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 PPM1AP35813 382 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 BCL6P41182 706 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 CACNB3P54284 484 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 MANFP55145 182 aaKnown RBP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 SEC23AQ15436 765 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 PGS1Q32NB8 556 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 ANO6Q4KMQ2 910 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 PRR16Q569H4 304 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 CC2D1AQ6P1N0 951 aaPredicted RBP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 FAM9BQ8IZU0 186 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 CAMKK1Q8N5S9 505 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 SH3RF2Q8TEC5 729 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 DPF3Q92784 378 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 GCC1Q96CN9 775 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 C16orf92Q96LL3 132 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 PTCHD1Q96NR3 888 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 SLC2A13Q96QE2 648 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 JAM3Q9BX67 310 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 GPR62Q9BZJ7 368 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 QRSL1Q9H0R6 528 aaKnown RBP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 ARFGAP3Q9NP61 516 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 GPRC5BQ9NZH0 403 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 TPX2Q9ULW0 747 aaKnown RBP6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 LRCH1Q9Y2L9 728 aa6.41□□□□□ -1.38
TM9SF3-202ENST00000443638 hCG_1642624A0A1W2PR95 340 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 H7BY64 318 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 KCNK3O14649 394 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 BCRP11274 1271 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 HOXB4P17483 251 aaPredicted RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 RXRBP28702 533 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 PREPP48147 710 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 MRPS9P82933 396 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 TNFAIP2Q03169 654 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 SRSF11Q05519 484 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 TBX2Q13207 712 aaPredicted RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 SNX17Q15036 470 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 EPHA7Q15375 998 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 UAP1L1Q3KQV9 507 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 FIGNQ5HY92 759 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 L1TD1Q5T7N2 865 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 CDPF1Q6NVV7 123 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 TMEM151AQ8N4L1 468 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 TOP6BLQ8N6T0 577 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 LINC00116Q8NCU8 138 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 CCT6BQ92526 530 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 BTBD1Q9H0C5 482 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 MRPL18Q9H0U6 180 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 SEMA4AQ9H3S1 761 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 CLDND1Q9NY35 253 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 MSRAQ9UJ68 235 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 SRPK3Q9UPE1 567 aa6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 LRRFIP2Q9Y608 721 aaKnown RBP6.4□□□□□ -1.38
TM9SF3-202ENST00000443638 A0A087WV62 115 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 C7orf72A4D263 438 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 CAPN8A6NHC0 703 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 M0R3H8 397 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 CLASP2O75122 1294 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 NFICP08651 508 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 GSTM1P09488 218 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 ZNF865P0CJ78 1059 aaPredicted RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 EDNRBP24530 442 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 GPSM2P81274 684 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 DDX10Q13206 875 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 CDK5R2Q13319 367 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 CNN3Q15417 329 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 MUM1Q2TAK8 710 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 SFRP5Q5T4F7 317 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 IZUMO3Q5VZ72 239 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 OTOP3Q7RTS5 596 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 CPNE8Q86YQ8 564 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 SIRT2Q8IXJ6 389 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 GPATCH11Q8N954 259 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 PIWIL2Q8TC59 973 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 LRTOMTQ8WZ04 291 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 RTF1Q92541 710 aaKnown RBP6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 PHKBQ93100 1093 aa6.39□□□□□ -1.39
TM9SF3-202ENST00000443638 KIAA1191Q96A73 305 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms