RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DBR1Q9UK59 544 aaKnown RBP25.66■■□□□ 1.7
CPSF4-204ENST00000436336 CYBAP13498 195 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 YWHABP31946 246 aaKnown RBP25.66■■□□□ 1.7
CPSF4-204ENST00000436336 CNNM4Q6P4Q7 775 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 PPTC7Q8NI37 304 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 RAET1EQ8TD07 263 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 GSDMAQ96QA5 445 aa25.66■■□□□ 1.7
CPSF4-204ENST00000436336 GNEQ9Y223 722 aaKnown RBP25.66■■□□□ 1.7
CPSF4-204ENST00000436336 MYMKA6NI61 221 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 ZBTB39O15060 712 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 ADCY6O43306 1168 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 LGR5O75473 907 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 OR6J1Q8NGC5 347 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 PXYLP1Q8TE99 480 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 PCYT2Q99447 389 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 BMP2KQ9NSY1 1161 aaPredicted RBP25.65■■□□□ 1.7
CPSF4-204ENST00000436336 EMSYQ7Z589 1322 aa25.65■■□□□ 1.7
CPSF4-204ENST00000436336 MYH11P35749 1972 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 ADCY3O60266 1144 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 ZNF862O60290 1169 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 AKR1A1P14550 325 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 PTGS1P23219 599 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 STAT5BP51692 787 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 TYRO3Q06418 890 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 GPBP1Q86WP2 473 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 AZI2Q9H6S1 392 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 ANKEF1Q9NU02 776 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 Q9Y3F1 56 aa25.64■■□□□ 1.7
CPSF4-204ENST00000436336 CYP11B2P19099 503 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 OTUD6AQ7L8S5 288 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 TRIML1Q8N9V2 468 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 TRPV1Q8NER1 839 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 DDX12PQ92771 950 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 HMGCRP04035 888 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 RPN1P04843 607 aaKnown RBP25.63■■□□□ 1.69
CPSF4-204ENST00000436336 ELNP15502 786 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 PRKCEQ02156 737 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 PLPPR4Q7Z2D5 763 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 AFG1LQ8WV93 481 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 RMND1Q9NWS8 449 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 KCND2Q9NZV8 630 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 MAN1B1Q9UKM7 699 aa25.63■■□□□ 1.69
CPSF4-204ENST00000436336 ARHGEF35A5YM69 484 aa25.62■■□□□ 1.69
CPSF4-204ENST00000436336 STBD1O95210 358 aa25.62■■□□□ 1.69
CPSF4-204ENST00000436336 RARRES1P49788 294 aa25.62■■□□□ 1.69
CPSF4-204ENST00000436336 ASIC1P78348 528 aa25.62■■□□□ 1.69
CPSF4-204ENST00000436336 CACNB2Q08289 660 aaPredicted RBP25.62■■□□□ 1.69
CPSF4-204ENST00000436336 XKR3Q5GH77 459 aa25.62■■□□□ 1.69
CPSF4-204ENST00000436336 BIN1O00499 593 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 KLRC4O43908 158 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 NLRP12P59046 1061 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 KCNB1Q14721 858 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 STX1AQ16623 288 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 ARSHQ5FYA8 562 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 UTP14CQ5TAP6 766 aaKnown RBP25.61■■□□□ 1.69
CPSF4-204ENST00000436336 RINT1Q6NUQ1 792 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 ANO5Q75V66 913 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 DYMQ7RTS9 669 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 TLK2Q86UE8 772 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 CCDC43Q96MW1 224 aaKnown RBP25.61■■□□□ 1.69
CPSF4-204ENST00000436336 TSPY26PQ9H489 355 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 SMARCAD1Q9H4L7 1026 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 ANO10Q9NW15 660 aa25.61■■□□□ 1.69
CPSF4-204ENST00000436336 PVALEFA0A1B0GWK0 134 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
CPSF4-204ENST00000436336 PPFIA4O75335 1185 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 OATP04181 439 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 ATP4AP20648 1035 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 SLC26A2P50443 739 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 TRIM32Q13049 653 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 GLG1Q92896 1179 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 CCDC47Q96A33 483 aaKnown RBP25.6■■□□□ 1.69
CPSF4-204ENST00000436336 DNAJC19Q96DA6 116 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 TRIM17Q9Y577 477 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 KRT18P05783 430 aaKnown RBP25.6■■□□□ 1.69
CPSF4-204ENST00000436336 MMP3P08254 477 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 HOXD8P13378 290 aaPredicted RBP25.6■■□□□ 1.69
CPSF4-204ENST00000436336 MORC3Q14149 939 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 C1orf186Q6ZWK4 172 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 UNC13DQ70J99 1090 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 SLAIN1Q8ND83 568 aa25.6■■□□□ 1.69
CPSF4-204ENST00000436336 SEPT9Q9UHD8 586 aaPredicted RBP25.6■■□□□ 1.69
CPSF4-204ENST00000436336 SEPT4O43236 478 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 DUSP11O75319 330 aaKnown RBP25.59■■□□□ 1.69
CPSF4-204ENST00000436336 PRKAR2AP13861 404 aaKnown RBP25.59■■□□□ 1.69
CPSF4-204ENST00000436336 XKR9Q5GH70 373 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 TRMT1LQ7Z2T5 733 aaKnown RBP25.59■■□□□ 1.69
CPSF4-204ENST00000436336 FAM167AQ96KS9 214 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 RUSC1Q9BVN2 902 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 AP5M1Q9H0R1 490 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 NRBP2Q9NSY0 501 aa25.59■■□□□ 1.69
CPSF4-204ENST00000436336 A6NJR5 290 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 LGALS2P05162 132 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 GIT2Q14161 759 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 DGKDQ16760 1214 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 KMT5BQ4FZB7 885 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 MAP3K21Q5TCX8 1036 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 PLA2G4FQ68DD2 849 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 ISM2Q6H9L7 571 aa25.58■■□□□ 1.69
CPSF4-204ENST00000436336 PADI6Q6TGC4 694 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms