RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 EFCAB5A4FU69 1503 aa7.06□□□□□ -1.28
LINC00458-202ENST00000427299 TIAM1Q13009 1591 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 RRBP1Q9P2E9 1410 aaKnown RBP7.05□□□□□ -1.28
LINC00458-202ENST00000427299 CUTAO60888 179 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 RAD17O75943 681 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 PABPC1P11940 636 aaKnown RBP7.05□□□□□ -1.28
LINC00458-202ENST00000427299 ATP2B1P20020 1258 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 DBPQ10586 325 aaPredicted RBP7.05□□□□□ -1.28
LINC00458-202ENST00000427299 RNF151Q2KHN1 245 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 ZNF568Q3ZCX4 644 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 USP39Q53GS9 565 aaKnown RBP7.05□□□□□ -1.28
LINC00458-202ENST00000427299 Q6ZSN1 163 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 IFNL3Q8IZI9 196 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 SH3RF2Q8TEC5 729 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 CD244Q9BZW8 370 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 SLC39A2Q9NP94 309 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 OAZ3Q9UMX2 235 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 SLC30A1Q9Y6M5 507 aa7.05□□□□□ -1.28
LINC00458-202ENST00000427299 BLACEA4D250 179 aa7.04□□□□□ -1.28
LINC00458-202ENST00000427299 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
LINC00458-202ENST00000427299 FHL2Q14192 279 aa7.04□□□□□ -1.28
LINC00458-202ENST00000427299 NRN1LQ496H8 165 aa7.04□□□□□ -1.28
LINC00458-202ENST00000427299 IPPKQ9H8X2 491 aa7.04□□□□□ -1.28
LINC00458-202ENST00000427299 WDR97A6NE52 1622 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 ESYT3A0FGR9 886 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 IQCA1LA6NCM1 817 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 PLSCR1O15162 318 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 CR2P20023 1033 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 DUSP8Q13202 625 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 NSMFQ6X4W1 530 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 EXTL1Q92935 676 aa7.03□□□□□ -1.28
LINC00458-202ENST00000427299 ASXL2Q76L83 1435 aa7.02□□□□□ -1.29
LINC00458-202ENST00000427299 MATN2O00339 956 aa7.02□□□□□ -1.29
LINC00458-202ENST00000427299 NARSO43776 548 aaKnown RBP7.02□□□□□ -1.29
LINC00458-202ENST00000427299 ACO1P21399 889 aaKnown RBP7.02□□□□□ -1.29
LINC00458-202ENST00000427299 ETV4P43268 484 aa7.02□□□□□ -1.29
LINC00458-202ENST00000427299 YOD1Q5VVQ6 348 aaPredicted RBP7.02□□□□□ -1.29
LINC00458-202ENST00000427299 DPYSL5Q9BPU6 564 aa7.02□□□□□ -1.29
LINC00458-202ENST00000427299 DNMBPQ6XZF7 1577 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 THOC2Q8NI27 1593 aaKnown RBP7.01□□□□□ -1.29
LINC00458-202ENST00000427299 KLF4O43474 513 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 ZNF202O95125 648 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 TGFB2P61812 414 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 ABHD18Q0P651 414 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 ZMAT1Q5H9K5 638 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 POLNQ7Z5Q5 900 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 ALG1Q9BT22 464 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 SRPK3Q9UPE1 567 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 R3HCC1Q9Y3T6 440 aaKnown RBP7.01□□□□□ -1.29
LINC00458-202ENST00000427299 FHAD1B1AJZ9 1412 aa7.01□□□□□ -1.29
LINC00458-202ENST00000427299 PCF11O94913 1555 aaKnown RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 FAM90A27PA6NNH2 459 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 PTPN1P18031 435 aaKnown RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 PTH1RQ03431 593 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 IFRD2Q12894 506 aaPredicted RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 NFYCQ13952 458 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 BTBD8Q5XKL5 378 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 MAMDC4Q6UXC1 1216 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 DPP8Q6V1X1 898 aaPredicted RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 ANKS3Q6ZW76 656 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 AMER2Q8N7J2 671 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 ST13P5Q8NFI4 369 aaPredicted RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 SCYL1Q96KG9 808 aa7□□□□□ -1.29
LINC00458-202ENST00000427299 PPP1R1BQ9UD71 204 aaPredicted RBP7□□□□□ -1.29
LINC00458-202ENST00000427299 ARHGAP35Q9NRY4 1499 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 TRAV20A0A0B4J274 112 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 WNT9AO14904 365 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 CDC14BO60729 498 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 GTF2F1P35269 517 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC00458-202ENST00000427299 RRADP55042 308 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 DGCR2P98153 550 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 NOLC1Q14978 699 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC00458-202ENST00000427299 CFHR4Q92496 578 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 PLA2G12BQ9BX93 195 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 ZDHHC5Q9C0B5 715 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 CSRNP2Q9H175 543 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 NR2E1Q9Y466 385 aa6.99□□□□□ -1.29
LINC00458-202ENST00000427299 TTBK1Q5TCY1 1321 aaPredicted RBP6.99□□□□□ -1.29
LINC00458-202ENST00000427299 FYCO1Q9BQS8 1478 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 IL13RA1P78552 427 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 TBR1Q16650 682 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 DPH6Q7L8W6 267 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 NLGN4XQ8N0W4 816 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 CHFRQ96EP1 664 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 FAM89AQ96GI7 184 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 OR14A2Q96R54 314 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
LINC00458-202ENST00000427299 ARHGAP28Q9P2N2 729 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 TRAF6Q9Y4K3 522 aa6.98□□□□□ -1.29
LINC00458-202ENST00000427299 MAN2B1O00754 1011 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 PURAQ00577 322 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 PAK1Q13153 545 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 GPR19Q15760 415 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 LSM12Q3MHD2 195 aaKnown RBP6.97□□□□□ -1.29
LINC00458-202ENST00000427299 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 ARHGAP36Q6ZRI8 547 aa6.97□□□□□ -1.29
LINC00458-202ENST00000427299 CXXC5Q7LFL8 322 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms